KEGG   Variovorax paradoxus EPS: Varpa_1318
Entry
Varpa_1318        CDS       T01392                                 
Name
(GenBank) short-chain dehydrogenase/reductase SDR
  KO
K00065  2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00040  Pentose and glucuronate interconversions
vpe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    Varpa_1318
Enzymes [BR:vpe01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.127  2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
     Varpa_1318
SSDB
Motif
Pfam: adh_short_C2 adh_short KR SDR Epimerase Sacchrp_dh_NADP NAD_binding_7 GDP_Man_Dehyd F420_oxidored ADH_zinc_N NmrA NAD_binding_10 YjeF_N 3Beta_HSD NAD_binding_2 3HCDH_N AdoHcyase_NAD 2-Hacid_dh_C RmlD_sub_bind
Other DBs
NCBI-ProteinID: ADU35534
UniProt: E6V0D0
LinkDB
Position
complement(1472504..1473262)
AA seq 252 aa
MFDLTGKVALVTGGNGGIGLGMAQGLAKAGARVIVAARNAQKSSAAVEALKALGSDSFAL
ELDVTSEASVQKAFDEAVARCGRLDILVNNAGTTVRKPVDQLALAEWHQVMDTNLTSAFL
CSRAAHPHLQRAGGGKIINIGSMMSIFGAPYAPAYAASKAGIVQLTKSTALSWAADNIQV
NAILPGWFETELTDGARSQIPGLYDRVVARAAAGRWGQPADIAGTAVFLASPASDYVTGT
AIPVDGGFSISG
NT seq 759 nt   +upstreamnt  +downstreamnt
atgttcgatctcacaggaaaagtcgcgctcgtcaccggcggcaacggcggcatcggcctc
ggcatggcacaaggcctcgcgaaggcaggcgcgcgtgtcatcgtcgcggcgcgcaatgca
cagaagtcctctgccgcggtcgaggcgctcaaggcgctgggcagcgacagcttcgcgctc
gaactcgacgtgaccagcgaagcgtcggtgcagaaggcgttcgacgaagccgtcgcgcgc
tgcggccggctcgacatcctcgtcaacaacgccggcaccacggtgcgcaagccggtcgac
cagctcgcgctcgccgaatggcaccaggtgatggacaccaacctcacgagcgccttcctc
tgcagccgcgccgcgcatccgcatcttcagcgcgcgggcggcggcaagatcatcaacatc
ggctcgatgatgtccatcttcggcgcgccctatgcgccggcctacgccgcgagcaaggcg
ggcatcgtgcagctcaccaagtcgaccgcgctctcgtgggcggccgacaacatccaggtc
aacgcaatcctgcccggctggttcgagaccgaactcacggacggcgcgcgcagccagatt
ccgggcctgtacgaccgcgtggtggcccgcgccgccgccggccgatggggccagccggcc
gatatcgccggcaccgcggtgttcctcgcgagccccgcttcggactacgtgacgggcacg
gccattccggtcgacggcgggttttctatctctggctga

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