Variovorax paradoxus EPS: Varpa_1323
Help
Entry
Varpa_1323 CDS
T01392
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_1323
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1323
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1323
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_1323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ADU35539
UniProt:
E6V0D5
LinkDB
All DBs
Position
complement(1479313..1480461)
Genome browser
AA seq
382 aa
AA seq
DB search
MKFFFQPLLIAALCATAAAAWADVNVGVTVSATGPAASLGIPEKNTIALMPKTIGGQKIN
YIVLDDASDTTAAVANTRKLIAENKVDIVLGSTTTPNSLAMIDVVSEAKVPMISIAASAR
IIEPMDAKKKWVFKTPQNDIMMSLAIAEHMAANGVKTVAYIGFSDAYGEGWSEEFAKAAA
LKKITVVANERFSRSDTSVTGQALKIMAAKPDAVLVGGSGTPAALPQKTLKERGYTGKMY
QTHGVANSDFLRVGGKDVEGTFLPAGPVLVAAQLPADNPVKKSALAYVTAYEAANGKGTV
STFGAHAWDAGLLMTSAVPVALKKAQPGTPEFRAALRDALEQTKDVSGAHGVFNMTEKDH
LGLDQRARVMVKIENGAWKYQP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcttcttccagccccttctgatcgccgcgctgtgcgccaccgccgccgcggcg
tgggccgacgtcaatgtcggcgtgacggtgtcggccaccggcccggccgcctcgctcggc
attcccgagaagaacaccatcgcgctgatgcccaagaccatcggtggccagaagatcaac
tacatcgtgctggacgatgcctccgacaccaccgcggccgtggccaacacccgcaagctg
atcgccgagaacaaggtcgacatcgtgctgggctccaccaccacgcccaactcgctcgcg
atgatcgacgtggtgagcgaagccaaggtgcccatgatctccatcgccgcctcggcccgc
atcatcgagccgatggacgcgaagaagaagtgggtcttcaagacgccgcagaacgacatc
atgatgtccctcgccatcgccgagcacatggctgccaacggcgtaaagaccgtcgcctac
atcggcttttccgatgcgtacggcgaaggctggtcggaagaattcgccaaggccgcggcg
ctcaagaagatcaccgtggtcgccaacgagcgcttctcgcgcagcgacacctcggtgacc
ggccaggcgctgaagatcatggccgccaagcccgacgccgtgctggtcgggggctcgggc
acgccggccgcactgccgcagaagacgctcaaggagcgcggctacaccggcaagatgtac
cagacgcacggcgtggcgaattccgacttcctgcgcgtgggcggcaaggatgtggaaggc
accttcctgcccgcaggccccgtgctcgtggcggcccagttgcctgccgacaacccggtg
aagaagtccgcactggcctacgtgacggcctatgaagcggccaacggcaagggcaccgtg
tcgaccttcggcgcgcatgcatgggacgcgggcctcttgatgacctcggccgtgccggtc
gcgctgaagaaggcgcagccgggcacgccggagttccgcgcggcgcttcgcgatgcgctg
gagcagaccaaggatgtgtcgggcgcgcatggcgtgttcaatatgaccgagaaggaccac
ctgggtctggaccaacgcgcgcgcgtgatggtgaagatcgagaacggcgcctggaaatac
cagccctga
DBGET
integrated database retrieval system
