KEGG   Variovorax paradoxus EPS: Varpa_1363
Entry
Varpa_1363        CDS       T01392                                 
Name
(GenBank) ABC transporter related protein
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Varpa_1363
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_1363
Transporters [BR:vpe02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    Varpa_1363
SSDB
Motif
Pfam: ABC_tran TOBE_2 AAA_21 CysA_C_terminal SMC_N AAA MIT_C NACHT AAA_5 AAA_22 AAA_16 Rad17 TOBE nSTAND_NTPase5 AAA_25 RsgA_GTPase AAA_28 ATPase_2 AAA_14 AAA_29 IstB_IS21 ORC-CDC6-like NB-ARC TsaE MobB nSTAND3
Other DBs
NCBI-ProteinID: ADU35579
UniProt: E6V0H5
LinkDB
Position
complement(1519088..1520149)
AA seq 353 aa
MELERIPIDIANCAKTYADGTRGLQPTNLHVEAGEVLALLGPSGCGKTTLLRLIAGLEAP
DAGSRIVFGDQDVTERPVEHRGVGMVFQSYALFPQMTVAANIGYGLRIRGVSPAEEKRAV
GELVDLVRLGGLENKRPAELSGGQRQRVALARAVAVRPRVLLLDEPLAALDAKLKESLRD
ELAELLRRLHITAIHVTHDQQEALAIADRLAVMRAGRIVQIGRGEDLYRAPAHPFVAEFL
GRVNRLERAPEAIAQGVVRLGGGTLPCPPAWQDHATLLVRPEDVEVSAPRPDWGIATVER
RTFLGDRVQLQLRVHDQPLLVADVERDNPFGPGDPVGLRVHPDRLMTSQEPTA
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggaacttgaacgcatccccatcgacatcgcgaactgcgcgaagacctatgccgacggc
acgcgcggcctgcaacccaccaacctgcatgtggaggccggcgaggtgctcgcgctgctc
ggcccctcgggctgcggcaagaccacgctgctgcggctgatcgcggggctggaggcgccc
gatgcgggcagccgcatcgtcttcggcgaccaagacgtgaccgagcgtcccgtcgagcat
cgcggcgtgggcatggtgttccagagctacgcgctttttccgcagatgacggtggcggcc
aacatcggctatggcctccgcatccgcggcgtgtcgcccgctgaagagaaacgcgcggtc
ggcgaactggtcgacctcgtgcgcctcggcgggctggagaacaagcgccccgccgaactc
tccggcggccagcgccagcgtgtggcccttgcccgtgcggtcgccgttcgcccccgcgtg
ctgctgctcgacgagccgctggccgcactcgacgccaagctcaaggagtcgctgcgcgac
gagctcgccgagctgctgcgccgcctgcacatcaccgccatccacgtgacgcacgaccag
caggaggcgctcgccatcgccgaccgcctcgccgtgatgcgcgccggccgcatcgtgcag
attggccgtggcgaggacctctaccgcgcgcccgcgcatcccttcgtcgcggagttcctc
ggccgggtgaaccggctcgaacgcgcgccagaggccatcgcgcagggcgttgtccgactc
ggtggaggcacgctgccttgcccgcccgcctggcaggaccatgcgacgctgctggtgcgg
cccgaagacgtcgaagtgagcgcgccccggcccgactggggcattgccaccgtcgagcgc
cgcaccttcctcggcgaccgcgtgcagcttcaactgcgcgtgcacgaccaaccgctgctg
gtggccgacgtggagcgcgacaaccccttcggtccgggcgatccggtcggccttcgcgtc
catcccgatcgcctgatgacgtcgcaggagcccacggcatga

DBGET integrated database retrieval system