Variovorax paradoxus EPS: Varpa_1363
Help
Entry
Varpa_1363 CDS
T01392
Name
(GenBank) ABC transporter related protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1363
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Varpa_1363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
CysA_C_terminal
SMC_N
AAA
MIT_C
NACHT
AAA_5
AAA_22
AAA_16
Rad17
TOBE
nSTAND_NTPase5
AAA_25
RsgA_GTPase
AAA_28
ATPase_2
AAA_14
AAA_29
IstB_IS21
ORC-CDC6-like
NB-ARC
TsaE
MobB
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADU35579
UniProt:
E6V0H5
LinkDB
All DBs
Position
complement(1519088..1520149)
Genome browser
AA seq
353 aa
AA seq
DB search
MELERIPIDIANCAKTYADGTRGLQPTNLHVEAGEVLALLGPSGCGKTTLLRLIAGLEAP
DAGSRIVFGDQDVTERPVEHRGVGMVFQSYALFPQMTVAANIGYGLRIRGVSPAEEKRAV
GELVDLVRLGGLENKRPAELSGGQRQRVALARAVAVRPRVLLLDEPLAALDAKLKESLRD
ELAELLRRLHITAIHVTHDQQEALAIADRLAVMRAGRIVQIGRGEDLYRAPAHPFVAEFL
GRVNRLERAPEAIAQGVVRLGGGTLPCPPAWQDHATLLVRPEDVEVSAPRPDWGIATVER
RTFLGDRVQLQLRVHDQPLLVADVERDNPFGPGDPVGLRVHPDRLMTSQEPTA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgaacgcatccccatcgacatcgcgaactgcgcgaagacctatgccgacggc
acgcgcggcctgcaacccaccaacctgcatgtggaggccggcgaggtgctcgcgctgctc
ggcccctcgggctgcggcaagaccacgctgctgcggctgatcgcggggctggaggcgccc
gatgcgggcagccgcatcgtcttcggcgaccaagacgtgaccgagcgtcccgtcgagcat
cgcggcgtgggcatggtgttccagagctacgcgctttttccgcagatgacggtggcggcc
aacatcggctatggcctccgcatccgcggcgtgtcgcccgctgaagagaaacgcgcggtc
ggcgaactggtcgacctcgtgcgcctcggcgggctggagaacaagcgccccgccgaactc
tccggcggccagcgccagcgtgtggcccttgcccgtgcggtcgccgttcgcccccgcgtg
ctgctgctcgacgagccgctggccgcactcgacgccaagctcaaggagtcgctgcgcgac
gagctcgccgagctgctgcgccgcctgcacatcaccgccatccacgtgacgcacgaccag
caggaggcgctcgccatcgccgaccgcctcgccgtgatgcgcgccggccgcatcgtgcag
attggccgtggcgaggacctctaccgcgcgcccgcgcatcccttcgtcgcggagttcctc
ggccgggtgaaccggctcgaacgcgcgccagaggccatcgcgcagggcgttgtccgactc
ggtggaggcacgctgccttgcccgcccgcctggcaggaccatgcgacgctgctggtgcgg
cccgaagacgtcgaagtgagcgcgccccggcccgactggggcattgccaccgtcgagcgc
cgcaccttcctcggcgaccgcgtgcagcttcaactgcgcgtgcacgaccaaccgctgctg
gtggccgacgtggagcgcgacaaccccttcggtccgggcgatccggtcggccttcgcgtc
catcccgatcgcctgatgacgtcgcaggagcccacggcatga
DBGET
integrated database retrieval system