Variovorax paradoxus EPS: Varpa_1364
Help
Entry
Varpa_1364 CDS
T01392
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1364
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Varpa_1364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ADU35580
UniProt:
E6V0H6
LinkDB
All DBs
Position
complement(1520139..1520939)
Genome browser
AA seq
266 aa
AA seq
DB search
MRTTSQPKAPFLLAITVLVSLFMIAPMLLSVMAGLVNNYSAGLKSGLTLRWLGEVWENYG
GTVGWSIGLAVACVICTVLLGVPCAYALARSRSRAARIFEELLTLPVAVPGLATALALIL
AYGQLTAFRTSFAFILVGHIVFTLPFMVRTVSSAFQRDDLLALEEAARSLGANFRQRFMG
ILVPAVFPAIVAGSLMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYASMRIEIGSAYTL
VFFAVILPVLWGLQYLANLMQKRHGT
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgacatcgcaacccaaggcgcccttcctgctcgccatcaccgtgctggtgagc
ctcttcatgatcgcgccgatgctgctgtcggtgatggcggggctggtcaacaactacagc
gctggcctgaaaagcggcctcacgctgcgctggctcggcgaggtgtgggagaactacggc
ggcaccgtcggctggtctatcgggctggccgtcgcctgcgtgatctgcaccgtgctgctg
ggcgtgccttgcgcctatgcactcgcgcgcagtcgctcgcgggccgcgcgcatcttcgag
gaactgctgacgctgcccgtcgccgtgcccggcctcgcgacggcgctcgcgctgatcctc
gcctacggccagctcaccgcgtttcgcacaagcttcgccttcatcctcgtgggccacatc
gtcttcacgctgcccttcatggtgcgcaccgtgagctcggccttccagcgcgacgacctg
ctcgcgctcgaggaagccgctcgctcgctgggcgcgaacttccgccagcgcttcatgggc
atcctcgtgcccgcggtgttccccgccatcgtggccggcagcctgatggtcttcacgctc
tcggtgggcgaattcaaccttacctggatgctgcacacgccgctcacccgcacgctgcca
gtgggcctggccgacagctacgcctcgatgcgcatcgagatcggatcggcctacacgctg
gtcttcttcgcagtgatcctcccggtgctgtggggcctgcagtaccttgccaacctgatg
cagaaacgccatggaacttga
DBGET
integrated database retrieval system
