Variovorax paradoxus EPS: Varpa_1401
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Entry
Varpa_1401 CDS
T01392
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_1401
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpe01007
]
Varpa_1401
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_1401
Enzymes [BR:
vpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Varpa_1401
Amino acid related enzymes [BR:
vpe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Varpa_1401
Transfer RNA biogenesis [BR:
vpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Varpa_1401
Prokaryotic type
Varpa_1401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1b
EXS
Motif
Other DBs
NCBI-ProteinID:
ADU35617
UniProt:
E6V1G1
LinkDB
All DBs
Position
complement(1557979..1560858)
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AA seq
959 aa
AA seq
DB search
MSEPTTPAAQPGLESLSKSFEPIAIEAHWGPEWEKRGYAKAGYRGTQQPKEGADSFAIQL
PPPNVTGTLHMGHAFNQTVMDSLTRYHRMKGDNTLWVPGTDHAGIATQIVVERQLQEQKI
SRHDLGRKNFVARVWEWKEKSGNTITQQMRRMGDTVDWSREYFTMDDDLSAVVTQTFVKL
YEEGLIYRGKRLGNWDPVLKTSVSDLEVESEEEDGSLWHIAYPLEDGSGTLTVATTRPET
MLGDTAVMVHPEDERYKHLIGQRVKLPLVDRLIPIIADDYVDKEFGTGVVKVTPAHDYND
YAVGQRHKLEMIGILTLDATINDNAPEKYRGMDRFVARKAIVADLDALGLLVEVKKHKLM
VPRCARSGAIVEPMLTDQWYVAMTRPGADGQSIAQKAIDVVKSGEVRFVPENWVNTYNHW
MENIQDWTISRQLWWGHQIPAWYDEEGNVYVAESEADAQAKAPGKKLTRDEDVLDTWYSA
ALVPFSSLGWPAKTQDLELYLPSQVLVTGYDIIFFWVARMIMMTKHFIGKVPFKDVYMHG
LVRDAQGKKMSKSEGNVLDPVDLIDGIQLPELLDKRTQGLRKPETAPAVRKNTQKEFPDG
IPAFGADALRFTFASLASLGRNINFDSKRCEGYRNFCNKLWNATRFVLMNCEGQDCGLME
HTKEECKVGGPAHGYLKFSRADYWIVSQLQRVEAEVAKGFEEYRLDNVANAIYQFAWDEF
CDWYLEIAKVQIQTGDDSQKRATRRTLIRTLETLLRLAHPIIPFITEELWQKVSKVAGRE
GESIMIAAYPKSQPEKIDEAAEAHVARLKALVDACRTLRGEMNVSPATRLPLYALADDAE
GAAFLRESAPVLQALAKLKEVKVFDDEASWQAAAEAAPVAVVGAARLCLHMEIDKAAEKL
RIGKEIARIEGEIAKVHAKLGNEAFVAKAPPAVIEQERKRLTDFSAMLERLRDQLVRLG
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccaccacccctgccgcccaacctggtctggagagcctctccaaatcgttc
gaacccatcgccatcgaggcgcactggggccccgaatgggaaaagcgcggctacgccaag
gccggctaccgcggcacgcagcaacccaaggaaggcgccgattcgttcgcgatccagctg
ccgccgcccaatgtgaccggcacgctgcacatgggccatgcgttcaaccagacggtgatg
gacagcctcacgcgctaccaccgcatgaagggcgacaacacgctgtgggtgccgggcacc
gaccacgccggcatcgccacgcagatcgtggtggagcgccagctccaggaacagaagatc
agccgccacgacctgggccgcaagaacttcgtggcgcgcgtgtgggaatggaaagagaag
tcgggcaacaccatcacccagcagatgcgccgcatgggcgatacggtggactggagccgc
gagtacttcacgatggacgacgacctctcggcggtcgtgacgcagaccttcgtgaagctg
tacgaagagggcctcatctaccgcggcaagcgcctgggcaactgggacccggtgctcaag
acctcggtgagcgacctcgaagtcgagagcgaagaggaagacggctcgctctggcacatc
gcctacccccttgaagacggcagcggcacactgaccgtggccaccacccggcccgagacc
atgctcggcgacacggccgtgatggtccaccccgaagacgagcgctacaagcacctgatc
ggccagcgcgtgaagctgccgctggtggaccggctgattcccatcattgcggacgactac
gtcgacaaggaattcggcaccggcgtcgtgaaggtcacgcccgcgcacgactacaacgac
tacgcggtcggccagcgccacaagctcgagatgatcggcatcctcacgctggacgcgacc
atcaacgacaacgcgcccgagaagtaccgcggcatggaccgcttcgtggcgcgcaaggcc
atcgtggccgacctggacgccctgggcctgctcgtcgaggtgaagaagcacaagctgatg
gtgccgcgctgcgcgcgctcgggcgccatcgtcgagccgatgctcaccgaccagtggtac
gtggcaatgacgcgccccggcgccgacggccagtcgatcgcgcagaaggcgatcgacgtg
gtgaagtccggcgaggtgcgcttcgtgccggagaactgggtcaacacctacaaccactgg
atggagaacatccaggactggacgatttcgcgccagctctggtggggccaccagattccg
gcctggtacgacgaggaaggcaatgtgtacgtggccgagagcgaggccgatgcgcaggcc
aaggcgccgggcaagaagctcacccgcgacgaggacgtgctcgacacctggtactccgcg
gcgctggtgcccttctcttcgctgggctggcccgcaaagacccaggacctcgagctctac
ctgccttcgcaggtgctcgtgacgggctacgacatcatcttcttctgggtcgcccggatg
atcatgatgaccaagcacttcatcggcaaggtgcccttcaaggacgtgtacatgcacggc
ctggtgcgcgatgcgcagggcaagaagatgagcaagtccgagggcaacgtgctcgacccg
gtggacctgatcgatggcattcaattgcccgagttgctcgacaagcgcacgcagggcctg
cgcaagcccgagacggcccccgcggtgcgcaagaacacgcaaaaagaatttccggacggc
attccggccttcggcgccgatgcgctgcgcttcaccttcgcatcgctcgcatctctgggt
cgcaacatcaacttcgactcgaagcgctgcgagggttatcgcaacttctgcaacaaactg
tggaacgccacgcgcttcgtgctgatgaactgcgaaggccaggactgcggcctgatggag
cacacgaaggaagagtgcaaggtcggcggcccggcccacggctatctgaagttcagccgc
gcggactactggatcgtctcgcagttgcagcgcgtggaagccgaagtggccaagggcttc
gaggaataccgcctcgacaatgtggccaacgcgatctaccagttcgcctgggacgagttc
tgcgactggtacctggaaatcgcgaaggtgcagatccagaccggcgacgactcgcagaaa
cgcgccacgcgccgcacgctgatccgcacgctcgagacgctgctgcgcctcgcgcatccg
atcattccgttcatcaccgaagaactctggcagaaggtctcgaaggtggcgggccgcgaa
ggcgagtcgatcatgatcgcggcctatccgaagagccagcccgagaagatcgacgaggcg
gccgaggcgcacgttgcgcgcctgaaggcgctggtggatgcatgccgcacgctgcggggc
gagatgaacgtgtcgcccgccacgcgcctgccgctctacgcgctggccgacgatgccgaa
ggcgcggcgttcctgcgcgaatcggcgccggtgctgcaggcgctcgccaagctcaaggaa
gtgaaggtcttcgacgacgaggcctcttggcaggcggcggccgaagcggcccccgtggct
gtagtgggcgctgcgcgtctgtgcctgcacatggaaatcgacaaggctgcagagaagctg
cgcatcggcaaggagatcgcacgcatcgaaggcgagatcgccaaggtgcacgccaaactc
ggtaacgaagcgttcgtcgcgaaggcgccgccggcggtgatcgagcaagaacgtaaacgt
ctgactgactttagcgccatgttggagcgacttcgcgaccaacttgtacgcctaggctga
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