Variovorax paradoxus EPS: Varpa_1436
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Entry
Varpa_1436 CDS
T01392
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_1436
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Varpa_1436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1436
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Varpa_1436
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ADU35652
UniProt:
E6V1J6
LinkDB
All DBs
Position
1601410..1602363
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AA seq
317 aa
AA seq
DB search
MIQRRAVTTTLGAALIGLSGLAHAQQAQEIYIPLVSKGFQHQFWQAVKSGAEQAAKDLKV
KVTFEGPETEAMVDKQIDMLSAALAKKPQAIGFAALDSQAAIPLLKKAQAAKIPVVAFDS
GVDSDIPVTTTTTDNKAAAALAADKMAELIGKSGEVALVVHDQTSRTGVDRRDGFVNRIK
STYPNIKIVSVQYGGGDQLKSTEITKSILQASPNLKGIFGANEGSAIGVVNGVKEMKRNG
KIVIIGYDSGKQQKNAIVDGSMAGAITQNPVGMGYKTVEMAVKAIKGEKLPKIVDTGFFW
YDKTNITDPKIAAVLYD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgattcaacgaagagcagtcaccaccacgctgggcgcggccctcatcggcctgtcgggc
cttgcacacgcgcagcaggcgcaagagatctacatcccgctcgtctccaagggcttccag
caccagttctggcaggccgtgaaatcgggcgccgagcaggccgcgaaggacttgaaggtc
aaggtcaccttcgaaggccccgagaccgaggcgatggtcgacaagcagatcgacatgctc
tccgccgcgctcgccaagaagccgcaagccatcggcttcgcagcacttgatagccaagcc
gccattccgttgctgaagaaggcgcaggccgcgaagattccggtggtcgcgttcgactcg
ggcgtggacagcgatattcccgtgaccaccaccacgaccgacaacaaggccgccgcggcg
ctggccgccgacaagatggccgagctgatcggcaagtcgggcgaggtggcgctcgtggtg
cacgaccagaccagccgcaccggcgtggaccggcgcgatgggttcgtgaaccgcatcaag
tcgacctacccgaacatcaagatcgtgagcgtgcagtacggcggcggcgaccagctgaag
tcgaccgaaatcaccaagtcgatattgcaggcctcgccgaacctcaagggcatcttcggc
gccaacgagggctctgccatcggcgtggtcaacggcgtgaaggagatgaagcgcaacggc
aagatcgtgatcatcggctacgactcgggcaagcagcagaagaacgccatcgtcgacggc
agcatggccggcgcgatcacgcagaaccccgtgggcatgggctacaagaccgtggagatg
gcggtgaaggcgatcaagggcgagaagctgcccaagatcgtggacacgggcttcttctgg
tacgacaagacgaacatcaccgacccgaagatcgcggcggttctgtacgactga
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