KEGG   Variovorax paradoxus EPS: Varpa_1513
Entry
Varpa_1513        CDS       T01392                                 
Name
(GenBank) porphobilinogen deaminase
  KO
K01749  hydroxymethylbilane synthase [EC:2.5.1.61]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00860  Porphyrin metabolism
vpe01100  Metabolic pathways
vpe01110  Biosynthesis of secondary metabolites
vpe01120  Microbial metabolism in diverse environments
vpe01240  Biosynthesis of cofactors
Module
vpe_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    Varpa_1513
Enzymes [BR:vpe01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.61  hydroxymethylbilane synthase
     Varpa_1513
SSDB
Motif
Pfam: Porphobil_deam Porphobil_deamC LysR_substrate GTP_cyclohydroI
Other DBs
NCBI-ProteinID: ADU35724
UniProt: E6V2K3
LinkDB
Position
1682519..1683445
AA seq 308 aa
MYFLGAVLSNIVIATRESRLALWQAEHVQALLQERGHTVSLLGMTTRGDQILDKSLSKVG
GKGLFVKELETAIEDGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDAMVSPRYASLD
ELPHGAVVGTSSLRRVVLLKARRPDVRIEPLRGNLDTRLRKLDEGQYDAIILAAAGLKRL
GLEDRIRVAFEPDDMLPAAGQGALGIEVRADREDLIELLAPLAHRGDWLSTAAERAVSRA
MGGSCSMPLAAHARWQADGVLRIDAAWGDPEGNAPLVRVHAQADVGDFGRADALGEHAAA
LLRDAGAH
NT seq 927 nt   +upstreamnt  +downstreamnt
atgtactttttgggagcggtcttgagcaatatcgtgatcgcgacgcgcgaaagccggttg
gccctttggcaagccgaacacgtgcaagcgcttctgcaagaaagaggccatacggtcagc
ctcctgggcatgacgacccggggcgaccagatcctcgacaagagcctgagcaaggtcggc
ggcaagggcctcttcgtgaaggaactcgaaacggcgatcgaagacggtcgcgccgacatc
gcggtgcactcgctcaaagatgtgccgatggacctgcccgaaggcttcgtcctcgcctgc
gtgctggagcgcgaggacccgcgcgatgcaatggtctccccccgatacgcctcgctcgac
gaactgccgcacggcgcggtggtcggcacctccagcctgcgccgcgtggtgctgctcaag
gccaggcggcccgacgtgcgcatcgaaccgctgcgcggcaacctcgatacgcgcctccgc
aagctcgacgaggggcagtacgacgcgatcatcctggcggccgcgggcttgaagcgcctc
ggcctcgaagaccgcatccgcgtggccttcgaaccagacgacatgctgccggcagcgggg
cagggcgctctgggcatcgaagtgcgcgccgaccgcgaggatctgatcgaactgctcgcg
ccgctcgcgcaccgcggcgactggctctcgaccgccgccgagcgcgcagtgagccgtgcg
atgggtggcagttgttcgatgccgctcgcggcgcatgcccgctggcaggccgatggcgtg
ttgcgcatcgatgctgcctggggcgaccctgaaggcaatgcgccgctcgttcgcgttcat
gcgcaggccgacgtcggtgacttcggacgcgccgacgcgctcggcgaacacgcggctgcg
ctactgcgcgacgcaggcgcccactga

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