Variovorax paradoxus EPS: Varpa_1572
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Entry
Varpa_1572 CDS
T01392
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00020
Citrate cycle (TCA cycle)
vpe00190
Oxidative phosphorylation
vpe00650
Butanoate metabolism
vpe00720
Other carbon fixation pathways
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
Module
vpe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vpe_M00149
Succinate dehydrogenase, prokaryotes
vpe_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Varpa_1572
00650 Butanoate metabolism
Varpa_1572
09102 Energy metabolism
00190 Oxidative phosphorylation
Varpa_1572
00720 Other carbon fixation pathways
Varpa_1572
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Varpa_1572
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
FAD_oxidored
GIDA
Pyr_redox_3
ThiF
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ADU35783
UniProt:
E6V3K3
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Position
complement(1744821..1746629)
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AA seq
602 aa
AA seq
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MTYTKEQITKRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGVGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQKNVEARTQFFVEWMALDLIRDDEG
DVVGVTALEMETGDLHILQAKTVLLATGGAGRIFQASTNAFINTGDGLGMAARSGIPLQD
MEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDYVLLKLDHLGADTIHKRLPSVYEIGVNFANVDITKEPIPVVPTIHYQ
MGGIPTNINGQVVIQKGEDNSAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHIVEFNDKLKEHKELPKDAADRTLERLNRLESTTTGEYAQDVAGEIRAVMQQHAAVFRK
QASMDEGVVKIAAVRERVNSIGLKDKSKVFNTARIEALEVDNLIEVAQATMVSAAARREC
RGAHTVEDYERPADDPVAPLGRDDANWMKHTLWYSQDNRLSYKPVKLQPLTVASVPPKVR
TF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacctatacaaaagaacaaatcaccaagcgcaagttcgacgtcgtgatcgtcggtgcc
ggcggctccggcatgcgcgcttcgctgcaactcgcacgcgccggcctcaacgtggctgtg
ctctccaaggtgttccccacccgttcgcacaccgtcgccgcgcaaggcggcgtgggcgca
tcgctcggcaacatgagcgaagacaactggcactaccacttctacgacacgatcaagggc
tccgactggctcggcgaccaggacgcgatcgagttcatgtgccgcgaagccccgaaggtc
gtgtacgagctcgagcacttcggcatgcctttcgaccgcaaccccgacggcacgatctac
cagcgcccgttcggcggccacacggccaactacggcgagaagcccgtgcagcgcgcctgc
gccgcggccgaccgcaccggccacgcgatgctgcacacgctctatcaaaagaacgtcgag
gcgcgcacccagttcttcgtcgaatggatggcgctggacctcatccgtgacgacgaaggt
gacgtggtcggcgtgaccgcgctcgaaatggaaaccggcgacctgcacatcctgcaggcc
aagaccgtgctgctggccaccggcggcgcgggccgcatcttccaggcctcgaccaacgcc
ttcatcaacaccggcgacggcctgggcatggccgcgcgctcgggcattccgctgcaggac
atggagttctggcagttccacccgaccggcgtggccggcgcgggcgtgcttctgaccgaa
ggctgccgcggcgaaggcgccatcctgctcaacagcaacggcgaacgcttcatggagcgc
tatgcgcccacgctgaaggacctggcgccgcgcgacttcgtctcgcgctcgatggaccag
gaaatcaaggaaggccgaggctgcggtcccaacaaggactacgtgctgctcaagctcgac
cacctgggcgccgacaccatccacaagcgcctgccttcggtgtacgaaatcggcgtcaac
ttcgccaacgtcgacatcacgaaggaaccgattcccgtcgtgccgaccatccactaccag
atgggcggcatcccgaccaacatcaacggccaggtcgtcatccagaagggcgaggacaac
agcgccgtggtaaacggcctctacgcggtgggcgaatgctcctgcgtgagcgtgcacggc
gcgaaccgcctgggcacgaactcgctgctcgacctcttggtgttcggccgcgcggccggc
aaccacatcgtcgagttcaacgacaagctgaaggaacacaaggaactcccgaaggatgcg
gccgaccgcacgctggagcgtctgaaccgcctcgaatcgaccaccaccggcgaatacgca
caggacgtggccggcgagatccgcgccgtcatgcaacagcacgccgcggtgttcaggaag
caagcctcgatggacgaaggcgtggtcaagatcgccgccgtgcgcgagcgcgtcaattcg
atcggcctgaaggacaagtccaaggtgttcaacaccgcccgcatcgaagcgctggaagtc
gacaacctgatcgaagtggcgcaggccacgatggtctcggccgccgcccgccgcgaatgc
cgcggcgcccacacggtggaagactacgagcgccccgcggacgacccggtcgcgccgctc
ggccgcgacgacgccaactggatgaagcacacgctctggtacagccaggacaaccgcctc
tcgtacaagccggtcaagctgcagccgctcacggtggcctcggttccaccgaaggtccgc
acgttctaa
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