Variovorax paradoxus EPS: Varpa_1575
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Entry
Varpa_1575 CDS
T01392
Name
(GenBank) transcriptional regulator, GntR family
KO
K03710
GntR family transcriptional regulator
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_1575
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Varpa_1575
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
MarR_2
HTH_DeoR
HTH_11
SsfX3_N
MarR
Motif
Other DBs
NCBI-ProteinID:
ADU35786
UniProt:
E6V3K6
LinkDB
All DBs
Position
complement(1747698..1748465)
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AA seq
255 aa
AA seq
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MNTPTALDEPPTPSTPSFSPLYQQIKTLILQSLQAGEWKPGEPIPSEMDLAVRYRVSQGT
VRKAIDELSAENLVVRRQGKGTFVATHAEQHVQYRFLKLVPDAGDPNIEGPAERTIVDCK
RLRASADVARALGLRTGDAVLQVRRVLAYAGVPTILEDLWLPGTPFKGLTAERLRAWPGP
MYALFETEFGVRMVRAEEKIRAVLPDAEQAALLAVTSQMPLLSVERVAHTYHDMPMELRR
GLYRTDTHHYRNQLG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccccactgccctcgacgagccccctacgccgtctacgccgtccttcagtccg
ctctaccagcagatcaagacattgatcctgcagagcctgcaggcgggcgagtggaagccg
ggcgaacccattcccagcgagatggacctggccgtgcgctatcgcgtgagccagggcacg
gtgcgcaaggccatcgacgaactctcggccgaaaacctggtggtgcgacgccagggcaag
ggcaccttcgtcgccacgcatgccgagcagcatgtgcagtaccgcttcctcaagctcgtg
cccgatgccggcgacccgaacatcgaaggccccgccgaacgcacgatcgtcgactgcaag
cgcctgcgcgcatcggccgacgtggcgcgcgcccttggccttcgcacgggcgacgccgtg
ctgcaggtgcgccgcgtgctcgcctatgcgggcgtgccgaccatcctggaagacctctgg
ctgcccggcacacccttcaagggactcacggccgagcgcctgcgcgcatggcccggcccg
atgtatgcgctcttcgaaaccgagttcggcgtgcgcatggtgcgcgccgaagaaaaaatc
cgtgcggtgcttcccgatgcggagcaagctgcgctgctcgcggtgacgtcgcagatgccg
ctgctgagcgtcgaacgcgtggcgcacacgtatcacgacatgccgatggaactgcgccga
ggcctctatcgcaccgacacgcaccactatcgcaaccagctcggctga
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