Variovorax paradoxus EPS: Varpa_1593
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Entry
Varpa_1593 CDS
T01392
Name
(GenBank) aconitate hydratase 1
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00020
Citrate cycle (TCA cycle)
vpe00630
Glyoxylate and dicarboxylate metabolism
vpe00640
Propanoate metabolism
vpe00720
Other carbon fixation pathways
vpe01100
Metabolic pathways
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
vpe01210
2-Oxocarboxylic acid metabolism
vpe01230
Biosynthesis of amino acids
Module
vpe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpe_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
vpe_M00012
Glyoxylate cycle
vpe_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Varpa_1593
00630 Glyoxylate and dicarboxylate metabolism
Varpa_1593
00640 Propanoate metabolism
Varpa_1593
09102 Energy metabolism
00720 Other carbon fixation pathways
Varpa_1593
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
Varpa_1593
4.2.1.99 2-methylisocitrate dehydratase
Varpa_1593
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ADU35803
UniProt:
E6V3M3
LinkDB
All DBs
Position
1774926..1777793
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AA seq
955 aa
AA seq
DB search
MAKAPAHAFASTLKTFKTASGKSGKYWSLKELAKQYPTIERLPVSIRIVLESVLRNCDGQ
KVSPKHVEELAHWAPNAERTDEIPFVVTRVVLQDFTGVPLLADLAAMRSVAAKLNKSPKT
IEPLVPVDLVVDHSVMVDYYGTPKALDLNMKLEFQRNNERYQFMKWGMQAFDTFRVVPPG
FGIVHQVNLEYFARGVYKSPHDNADVPAYYPDSLVGTDSHTTMINGIGVVGWGVGGIEAE
AAMLGQPVYMLTPDVVGFELTGKLREGVTATDLVLYVTAILRAEKVVGKFVEFFGPGAAS
IAVPDRATIGNMAPEYGATMGFFPVDEMTVAYFEGTGRTKEEVERFEAYYKAQGLFGMPA
PGDIDYTKIVKLDLGTVSPSLAGPKRPQDRIDLGHLSTKFSELYSKPNDANGFNQPPEKL
KQRYPLAIAGQGGDEEAAAPPAGSPRELVEMVANRSTKAAAHTSATAPPAPKGQVTIGNG
DVLIAAITSCTNTSNPSVMLAAGLLAKKAVEAGLTVKPHIKTSLAPGSRIVTEYLEKAGL
LPYLEKLGFYLAGYGCTTCIGNAGDLTPEINEAITKNDLIGAAVLSGNRNFEARIHPNLK
ANFLASPPLVVAFAIAGNVMTDLMTEPVGKGKNGKDVYLGDIWPSPKEIDENLRFAMNAK
SFRANYDKVKTDPGKFWSSIKGTEGQVYDWPKSTYIAEPPFFEGFKMKPHAADAGFKGAR
IMALFGDSITTDHISPAGSIKESSPAGIWLKAHGVPKADFNSYGSRRGNHDVMMRGTFAN
VRIKNLMIPPDANGTQEEGGVTLFQPGNQKMFIYDAAMKYMEEGTPTVVFGGEEYGTGSS
RDWAAKGTQLLGIKAVVARSFERIHRANLVGMGVLPLQFRGADSWQTLGLTGDEKIDVVI
GGELKPQMDVKLVVHRPDGNHQEVTVRLRIDTPIEVDYYKHGGILPFVLRQLLAA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcaccggctcacgcctttgcgtccaccctcaagaccttcaagaccgcatcg
ggcaagtccggcaaatactggtccctgaaggagctggccaagcaataccccacgatcgag
cggctgcccgtgtcgatccgcatcgtgctcgaatcggtgctgcgcaattgcgatggccag
aaggtttcgcccaagcacgtcgaagagctggcccattgggcgcccaacgcagagcgcacc
gacgagattccctttgtcgtcacccgcgtcgtgctgcaggacttcaccggcgtgcccctt
ttggccgacctggccgccatgcgcagcgtggccgccaagctgaacaagtcgcccaagacc
atcgagccgctggtgcctgtcgacctcgtggtcgaccactcggtgatggtcgactactac
ggcacccccaaggcgctcgacctcaacatgaagctggaattccagcgcaacaacgagcgc
taccagttcatgaagtggggcatgcaggccttcgacaccttccgtgtcgtgccgccgggc
ttcggcatcgtgcaccaggtcaacctcgaatacttcgcgcgcggtgtctacaagagcccg
catgacaacgcggacgtgcccgcctactaccccgactcgctggtcggcaccgacagccac
accaccatgatcaacggcatcggcgtggtcggctggggcgtgggcggcatcgaggccgag
gccgcgatgctgggccagccggtctacatgctcacgcccgatgtggtgggcttcgaactc
accggcaagctgcgcgaaggcgtcacggcgaccgacctggtgctgtacgtcaccgcgatc
cttcgcgccgaaaaggtggtcggcaagttcgtcgaattcttcggccccggcgctgcatcg
atcgccgtgcccgaccgcgcgaccatcgggaacatggcgcccgaatacggcgcgacgatg
ggcttcttcccggtcgacgaaatgaccgtggcttacttcgaaggcaccggccgcaccaag
gaagaggtcgagcgcttcgaggcctactacaaggcgcagggcctgttcggcatgcccgcg
ccgggcgacatcgactacaccaagatcgtcaagctcgacctgggcaccgtgtcgccgagc
ctcgcgggccccaagcgcccgcaggaccgcatcgacctcggtcacctgtccaccaagttc
tccgagctctacagcaagcccaacgacgcgaacggcttcaaccagccgcccgagaagctc
aagcagcgctatccgctcgccattgccggccagggcggcgacgaagaggccgccgcaccg
ccggccggctcgccgcgcgaactggtcgagatggtcgccaaccgctcgaccaaggccgcc
gcgcacaccagcgccacggcgccgcccgcgcccaagggccaggtcaccatcggcaacggc
gacgtgctgatcgcggccatcacctcgtgcaccaacacctcgaacccgagcgtgatgctc
gcggcgggcctcctggcgaagaaggcggtggaggctgggctcacggtcaagccgcacatc
aagacctcgctggccccgggctcgcgcatcgtcaccgaatacctggagaaggcgggcctc
ttgccgtacctggagaagctgggcttctacctcgcgggctacggctgcaccacctgcatc
ggcaatgccggtgacctcacgcccgagatcaacgaagccatcaccaagaacgacctcatc
ggtgcggccgtgctgtcgggcaaccgcaatttcgaggcgcgcatccatccgaacctgaag
gccaacttcctggcctcgccgccgctggtggtggccttcgcgatcgcgggcaacgtgatg
accgacctcatgaccgagcccgtgggcaagggcaagaacggcaaggacgtgtacctgggc
gacatctggcctagcccgaaggaaatcgacgagaacctgcgctttgcgatgaacgccaag
tcgttccgcgcgaactacgacaaggtgaagaccgacccgggcaagttctggagcagcatc
aagggcaccgagggccaggtgtacgactggcccaagtcgacctacatcgccgagccgccg
ttcttcgagggcttcaagatgaagccgcatgccgccgatgcgggcttcaagggcgcacgg
atcatggcgctcttcggcgactcgatcaccaccgaccatatctcgccggccggctccatc
aaggaaagctcgcccgcgggcatctggctcaaggcgcacggcgtgcccaaggccgacttc
aacagctatggctcgcgccgcggcaaccacgacgtgatgatgcgcggcaccttcgccaac
gtgcgcatcaagaacctgatgattccgccggacgccaacggcacgcaggaagagggcggc
gtcacgctgttccagccgggcaaccagaagatgttcatctacgacgccgccatgaagtac
atggaagagggcacccccacggtggtgttcggcggcgaggaatacggcaccggctcctcg
cgcgactgggccgccaagggcacgcagctcctgggcatcaaggccgtggtggcgcgcagc
ttcgagcgcatccaccgcgccaacctcgtcggcatgggcgtgctgccgctgcagttccgc
ggcgccgattcgtggcagacgctgggtctcacgggcgacgagaagatcgacgtggtgatc
ggcggcgaactcaagccgcagatggacgtgaagctggtcgtgcaccgcccagacggcaac
caccaggaggtgacggtgcgccttcgcatcgacacgccgatcgaggtcgactactacaag
cacggcggcatcctgccgttcgtgctgcggcagttgctggccgcctga
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