Variovorax paradoxus EPS: Varpa_1656
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Entry
Varpa_1656 CDS
T01392
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_1656
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1656
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_1656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Bmp
Peripla_BP_3
ETF
Motif
Other DBs
NCBI-ProteinID:
ADU35866
UniProt:
E6V4M5
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All DBs
Position
1836194..1837363
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AA seq
389 aa
AA seq
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MKVLNRFRALASIAVGLGALSAVAGAWAADLKVGFITSLSGPVSSLGIPYEKGMKAALAY
KADLGGRKIQMVQLDDASDPSTAARNARKMIDEDKVDVIIGTAGSPGALAIAGVARETKT
PLISIANANLPGEEGAWMVTLPQPAPLMVSAVVERMKKSGVKTVGYIGFSDAWGDLVYDA
LQKSAEPAGIKIVSNERYARADSSVTGQVLKIVALRPDAVITGTSGTPGALPYLALAERG
YKGQIYGMHALINPDFVRVGGAAVEGLLAPTGPVIVAEQLPNDNPIRKVSMDFRAAYQKA
NGAPPTDAFSAYTFDAWLLYLDAAQRALATKAEPGTPQFRLALRDAIVSTKELVGTHSVY
NFKPTDRYGSDERSRVVVKLEKGQWKLVP
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcctgaaccgattccgtgccctcgcaagcattgccgtgggcctcggcgccctg
agtgccgtggcgggcgcctgggcggccgatctcaaggtcgggttcatcacctcgctctcg
gggccggtctcgtcgctcggcattccctatgaaaagggcatgaaggccgcgctcgcctac
aaggcggacctgggcggccgcaagatccagatggtgcagctcgacgacgcgtcggacccg
tccacggccgcacgcaacgcccgcaagatgatcgacgaggacaaggtcgacgtcatcatc
ggcaccgcgggatcgcccggtgcgctggccatcgccggcgtggcgcgcgagacgaagacg
ccgctgatctccatcgccaatgccaacctgccgggcgaagagggcgcgtggatggtcacg
ctgccgcagcctgcgccgctgatggtgagcgcggtggtcgagcgcatgaagaaatcgggc
gtgaagacggtcggctacatcggcttttccgacgcctggggcgacctggtgtacgacgcg
ctgcagaagagcgcggagccggctggcatcaagatcgtgtcgaacgagcgctatgcgcgc
gccgattcgtcggtgaccgggcaggtgctcaagatcgtggcgctgcgccccgatgcagta
atcaccggcacctcgggcacgcccggcgcgctgccttacctggcgctcgcggagcgcggc
tacaagggccagatctacggcatgcatgcgctcatcaaccccgacttcgtgcgcgtgggc
ggtgctgccgtcgaaggcctgctcgcacccaccggcccggtgatcgtggccgagcagttg
cccaacgacaacccgatccgcaaggtgtcgatggacttccgcgccgcctaccagaaggcc
aacggcgcaccgccgaccgatgccttctcggcctacaccttcgacgcctggctgctgtac
ctcgatgcggcccagcgtgcgcttgccaccaaggccgagccgggcacgccgcagttccgc
cttgccctgcgcgatgccatcgtgagtaccaaggagctggtgggcacgcacagcgtctac
aacttcaagccgaccgatcgctatgggtcggacgaacgctcgcgtgtcgtcgtgaagctg
gaaaagggtcaatggaagctggttccctga
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