Variovorax paradoxus EPS: Varpa_1662
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Entry
Varpa_1662 CDS
T01392
Name
(GenBank) ABC transporter related protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_1662
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1662
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_1662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_23
SMC_N
AAA_29
RsgA_GTPase
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADU35872
UniProt:
E6V4N1
LinkDB
All DBs
Position
1842679..1844466
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AA seq
595 aa
AA seq
DB search
MNGNRKRMLWIAAVIVVLTLVPAVAGSFTVSLLNDIGIGALVALGLVLLTGVGGATSFGQ
AAFVGIAAYATAWLTTTQGMSPWIGLLFALLLTGISALAIGMLTLRLGGHFLPLSTIAWG
LSIAMLFGNVDALGRHTGLSNIPALQVGGWSLADPRSMYYLIWVVVGLACLFSHNLLQSR
PGRAIRGLRGGATLLASVGADAYRVRLTLFVTAALFAGLAGWLYAHMNRFVSPSPFDVRA
SIEYLLMAVAGGLGQLAGALVGAALVLVLKNGLQDVLPMLTQRAGQLEAVAFAALFILLL
HFARGGLMGLLRRWTRRRGGTQGASRYAAPPVDPLAHRQLPARGAQVLSVNGAVKRFGGL
VAVNDVSFDVKAGEIVGLIGPNGAGKSTMFNLLTCTLPMTSGQVRFLDHDIAGMPQRQVA
RLGLARTFQHVKLRPHMSLLDNVALGAHSRTRSGILKAGLRLDRKEETQILQEAQRQLDR
IGLGDRAHELAGSLPLGTQRILEIARALAADPVLLVLDEPAAGLRRKEKMALGDLLRKLR
EEGVTILIVEHDMDFVMKLVDRLVVMNFGSKLVEGVPSAVRADERVQAAYLGSVV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaaccgcaaacgcatgctgtggatcgccgcggtgatcgtcgtgctgacgctg
gtgccggcggtggcgggcagcttcacggtatcgctcctcaacgacatcggcatcggtgcg
ctggtggcgcttgggctggtgctgctcaccggcgtgggcggtgcgacctcgttcggccag
gcggccttcgtcggcatcgcggcctatgcgacggcatggcttaccaccacgcaaggcatg
tcgccgtggatcggcctcttgttcgcgttgctgctcacgggtatctcggcacttgccatc
ggcatgctcacgctgcggctcggcgggcactttttgccgctcagcaccatcgcgtggggc
ctgtcgatcgcgatgctgttcggcaacgtcgatgcgctcgggcggcacacggggctgtcg
aacattccggcgctgcaggtcggtggctggtcgctggccgatccacggtcgatgtactac
ctgatctgggtggtggtcgggcttgcctgcctgttcagccacaacctgctgcagtcgcgg
cccggccgtgcgattcgcgggctgcgcggcggtgcgacgctgctggcgagcgtcggcgcg
gatgcgtaccgcgtgcggctcacgctgttcgtgacggcagcgctcttcgcggggctggcg
ggctggctctatgcgcacatgaaccgcttcgtgagcccgtcgcccttcgacgtgcgcgcg
agcatcgagtacctgctgatggccgtggccggcgggctcgggcaactggcgggcgcgctg
gtgggcgccgccctggtgctggtgctgaagaacgggctgcaggacgtgctgccgatgctc
acgcagcgcgcggggcaactggaggccgtggcttttgccgcgctcttcatcctgctgctg
cactttgcgcgcggcgggttgatggggctgctgcggcgctggacgcggcggcgcggcggc
acgcaaggcgcctcgcgctatgcagcgccgccggtcgatccgctcgcgcatcggcaactg
ccggcgcgcggtgcgcaggtgctgtcggtgaacggcgcggtcaagcgcttcggtggtctg
gtggctgtgaacgacgtgagcttcgatgtgaaggccggcgagatcgtcgggctgatcggc
ccgaacggcgcgggcaagtcgaccatgttcaacctgctgacctgcacgctgccgatgaca
tcgggccaggtgcgctttctcgaccatgacattgccggcatgccgcagcggcaggtggcg
cggctgggcctggcgcgcaccttccagcacgtgaagctgcggccgcacatgagcctcctg
gacaacgtggcgctgggcgcgcattcgcgcacgcgctcgggcatcctgaaagcgggcctc
cggctcgaccgcaaggaggaaacgcagatcctgcaggaggcgcagcgacagctcgaccgc
atcggcctgggcgaccgcgcgcacgagctcgcgggcagcctgccgctgggcacgcagcgc
atcctggaaatcgcgcgcgcgctggccgccgaccctgtgctgctggtgctcgacgagccc
gcggccggtttgcgccgcaaggaaaagatggcgctcggcgatctgctgcgcaagttgcgc
gaagagggcgtgaccatcctcatcgtcgaacacgacatggactttgtgatgaaactggtg
gaccgtttggtggtgatgaacttcggctccaagctcgtggagggcgtgccatcggcggtg
cgtgccgacgagcgcgtgcaggctgcgtacctggggagcgttgtatga
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