Variovorax paradoxus EPS: Varpa_1690
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Entry
Varpa_1690 CDS
T01392
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1690
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_1690
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ADU35900
UniProt:
E6V5K3
LinkDB
All DBs
Position
1874026..1876215
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AA seq
729 aa
AA seq
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MSRIPSAPTLGLAALFGVASAPGFAIAQEAGTAGAAARSLPQVEVTDDAPSPNGRLDFDT
PSDTASRLGLTPRETPASVTVVNRSVIDARGAQNTQEILRAIPGVTAHDAPGNIGVSYRG
FGAGSIGQLFNGINVQYSIAARPVDSWIYDRVEAIGGPSSFLFGSGALGGSINYITKTPE
RSDFAEARLRLGTQHLQEASFGLNRRVAGDGGAGSHYARIDVNHRDANGWTDGTGSRSTQ
LAASQLSDLGGGLKHTLAYEFQDENVDRPYWGTPVLNPVAGTMRIDPGIRFRNFNSSDGL
YAQRVQWLRSVTEWQATDAFQLKNTFYAYDALRDYRNVESYRYNPGNTAVIRSGALLQRH
DQDVWGNRVEGLYKGRLGSLKSDWSFGLDFSVNRQTRFPNSLTGTVSTVNPYAFTVERFF
EVKGMVPGFRPDRDNKVRTTALYLENRTALLPSLHLIAALRHERIDLDLVNRRTVDAANP
ATFQRGYKPTTGRIGLVWDLAPGASLYAQYATAADPPSGVLSTASFADVRNNSELTTGRQ
VEIGTKLDFWQGKGTATLAAYGIRRKNIATQDPNNSTLTVLVGEQSSKGVELALGLQPTR
QWSLQGNLTYVDARYERFTQGGVSLAGRTPTNTPAMVANLWVSYAFTPRLEASVGVRHVS
KVYADAANTANWPGYTLLDLGLSWKVSNTVAVVGRIRNATDRIHALNVGSTFAYLGAPRT
ADVSLRVAF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtattccttccgcccccacgctggggctcgcggccctgttcggcgtcgcctcc
gcacccggcttcgcgatcgcgcaagaggctggcaccgccggcgctgccgcacggtcgctg
ccgcaggtcgaagtgaccgacgatgcgcccagtcccaacggccggctcgacttcgatacc
ccctccgacaccgcgagccgcctgggcctcacgccgcgcgagacgccggcttcggtcacc
gtggtgaaccgctcggtcatcgatgcgcgcggcgcgcagaacacgcaggagatcctgcgc
gccattcccggcgtgaccgcgcacgacgcgccgggcaacatcggcgtgagctaccggggc
ttcggcgccggctcgatcggccagctcttcaacggcatcaacgtgcagtattcgatcgcc
gcgcggccggtggacagctggatctacgaccgcgtcgaagccatcggcgggccgtcgagc
ttcctgttcggctcgggcgcgctgggcggctcgatcaactacatcaccaagacgccggag
cgcagcgactttgccgaagcgcgattgcgcctgggcacgcagcacctgcaggaagcctcc
ttcgggctgaaccgccgggtggccggcgatggcggcgcgggcagccattacgcgcgcatc
gacgtgaaccaccgcgatgccaacggatggaccgacggcacgggcagccgctccacgcag
ctcgcggcctcgcagctctcggacctgggcggaggcctcaagcacacgctggcctacgag
tttcaggacgagaacgtcgaccggccctactggggcacgcccgtgctcaacccggtggcc
ggcacgatgcgcatcgatcccggcatccgcttcaggaacttcaacagcagcgacggcctc
tacgcgcagcgcgtgcagtggctgcgctcggtcaccgaatggcaggccaccgacgcgttt
cagctgaagaacaccttctatgcctacgacgcactgcgcgactaccgcaatgtcgagagc
taccgctacaacccgggcaacaccgcggtgatccgctcgggcgcgttgctccagcggcac
gaccaggacgtgtggggcaaccgcgtcgagggtctctacaagggccggctcggcagcctg
aaaagcgactggtccttcgggctggacttcagcgtgaaccgccagacgcgctttcccaac
agcctgaccggcaccgtgagcaccgtgaatccgtatgccttcactgtcgagcgcttcttc
gaggtgaagggcatggtgccgggctttcgccccgaccgcgacaacaaggtgcggaccacc
gcgctctacctggagaaccgcaccgcgctgctgccttcgctgcacctcattgccgcgctg
cgccacgagcgcatcgacctcgacctggtgaaccggcgcaccgtggatgcggcgaacccc
gccaccttccaacgcggctacaagcccacgaccgggcgcatcggcctggtgtgggatctg
gcgccgggcgcgagcctgtatgcgcaatacgccaccgcggccgacccgccttcgggcgtg
ctctccaccgcgtctttcgccgacgtgcgcaacaacagcgagctcaccaccggccggcag
gtggagatcggcaccaagctcgatttctggcaaggcaagggcacggccacgcttgcggcc
tacggcattcgccgcaagaacatcgcgacgcaggacccgaacaacagcacgctcaccgtg
ctggtgggcgagcagtcgtccaagggcgtggagctggcgctcggcctgcagccgacgcgg
caatggtcgctgcagggcaacctcacctacgtcgatgcgcgctacgagcgcttcacgcag
ggcggcgtgtcgctcgcgggccgcacgccgaccaacacgccggccatggtcgcgaacctc
tgggtgtcgtatgcgttcacgccccgcctggaagccagcgtgggcgtgcggcatgtgagc
aaggtgtacgccgatgcggcaaacaccgcgaactggccgggctacacgctgctggacctc
gggctgagctggaaggtcagcaacaccgtcgccgtggtcggtcgcatccgcaacgcgacg
gaccgcatccacgcgctgaacgtcggcagcaccttcgcctacctcggcgcaccgcgcacg
gcggacgtctcgctgcgcgtggcgttctga
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