Variovorax paradoxus EPS: Varpa_1702
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Entry
Varpa_1702 CDS
T01392
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02033
peptide/nickel transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1702
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1702
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_1702
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
ADU35912
UniProt:
E6V5L5
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All DBs
Position
complement(1887687..1888622)
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AA seq
311 aa
AA seq
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MGYIVRRFLSTLPVMAVVAVVVFLLIHLSPGDPAALIAGDLASVEDIEKLRAALGLNLPL
WQQFAVWLGKLFTGDLGTSIFTQVPVSQLLGQRLEPTVSIAALTMLITLVVAVPLGTLAA
YRAGSWVDRLVMVFAVLAFSVPVFLVGYLLIYAFAIQLPWFPVQGYVRFAEGPGEWLRSL
VLPCVNLALVYIALVTRMTRATVLEVLHEDYIRTARAKGLGVLPVLGHALRNAAIPIATT
IGVGIALLIGGVVVTETVFAIPGVGRLVIDSVQRHDYPVIQSVLLLSAGVYVLINLLIDL
SYRLFDPRIQY
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggctacatcgttcgacgctttctttcgacgcttcccgtcatggcggtggtggccgtg
gtggtgttcctcctgatccacctgtcgccgggcgatccggcggcgctcatcgcgggcgat
ctcgcgagcgtggaagacatcgagaagctgcgcgccgcgctcgggctgaacctgccgctg
tggcagcagttcgcggtgtggctcggcaagctcttcaccggcgacctgggcacctcgatc
ttcacgcaggtgccggtgtcgcaactgctcggccagcggctggagcccacggtgtcgatc
gctgcgctcaccatgctcatcacgctggtggtggcggtgccgctgggcacgctcgcggcc
taccgcgcgggaagctgggtcgaccggctggtgatggtgttcgcggtgctcgcgttctcg
gtgccggtgttcctcgtgggctatctgctgatctacgcgttcgcgattcagctgccgtgg
tttccggtgcagggctatgtgcgttttgccgaagggccgggcgagtggctgcgctcgctg
gtgctgccgtgcgtgaacctggcgctggtgtacatcgcgctcgtgacccgcatgacgcgc
gccaccgtgctcgaagttctgcatgaagactacatccgcaccgcgcgcgccaagggcctg
ggcgtgctgccggtgctcgggcatgcgctgcgcaatgcggccattcccatcgccacgacc
atcggcgtgggcatcgcgttgctgatcggcggcgtggtggtcaccgagacggtgttcgcc
attccgggcgtggggcgcctcgtcatcgattcggttcagcgtcacgactacccggtgatc
cagagcgtgctgctgctgtcggcgggtgtgtacgtgctgatcaacctgctgatcgacctg
agctaccgcttgttcgatccgcgcatccagtactga
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