Variovorax paradoxus EPS: Varpa_1703
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Entry
Varpa_1703 CDS
T01392
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1703
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1703
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_1703
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADU35913
UniProt:
E6V5L6
LinkDB
All DBs
Position
complement(1888647..1890236)
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AA seq
529 aa
AA seq
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MKRRTLAASAAFVALALSAACLPALAQTPAPKTLKVVAHADLKILDPTFTTAYISRNFGY
MVYDTLFAQDSTGKPQPQMVEKYTASKDGKQWSFTLRPGLKFSDGSAVTSADVVASLQRW
AARDSLGRAMTASGAEWKQVDARNFTLTLTEPFGMVLDALAKPSGFPPVVLPERLAKLPA
TAPLTEVLGSGPFIFKRDEWVPGNKAVFVRNPNYVARSEPPNGLAGSKKSNFERVEWLYL
PDSNSAIAALKRGEVDIVEQLQPDYIAPLRTDSSVKIGSGGAYQGFLVMNQLHPPFNNPK
VRQALLQAVNQERFVAAMGYPLDMRMAYCPTFFICGSPNETSAGAEPYRKADAAKAKKML
ADAGYKGEKVVLLVPSDVPYLNAEALMAAQTMKSIGINVDAQNLDWASIGARRAKRDAPE
AGGWNMYVTVAGEFDANSPISNAYLGAACGNTLPGWPCDKQLDELRTAWLKETVPAKRKE
LLDAFQARAYEAVPYINAGQYSAAFAARANLKGLDKLWAGMPMFWALDR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacgaacgcttgccgcctctgccgcctttgttgccctggcgctttccgccgcg
tgcctcccggcgctcgcccagacacccgcgcccaagacgctcaaggtggtggcgcatgcg
gacctgaagatcctcgacccgaccttcacaaccgcctacatctcgcgcaacttcggctac
atggtctacgacaccctgttcgcgcaggactcgacgggcaagccgcagccgcagatggtc
gagaagtacacggcctcgaaagacggcaagcagtggagcttcacgctgcgcccgggcctg
aagttctccgacggcagcgccgtcacctcggccgatgtggtcgcctcgttgcaacgctgg
gccgcgcgcgacagcctgggccgcgcgatgaccgcgagcggcgcggagtggaagcaggtc
gatgcgcgcaacttcacgctcaccctcaccgagcccttcggcatggtgctcgatgcgctg
gccaagccctcgggctttccgccggtggtgctgcccgagcgcctggccaagctgccggcc
accgcgccgctcaccgaggtgctgggctcgggccccttcatcttcaagcgcgacgaatgg
gtgccgggcaacaaggcggtgttcgtgcgcaaccccaactacgtggcgcgcagcgaaccg
ccgaacggcctcgcaggcagcaagaagagcaacttcgagcgtgtcgaatggctgtacctg
cctgattcgaacagcgcgatcgcggccctgaagcgcggcgaagtcgacatcgtcgagcaa
ctgcagcccgactacatcgcaccactgcgcaccgactcgagcgtgaagatcggctcgggc
ggcgcctaccagggctttctggtgatgaaccagctgcatccgcccttcaacaatccgaag
gtgcgtcaggccttgctgcaggcggtgaaccaggagcgcttcgtcgcggccatgggctat
ccgctcgacatgcgcatggcttactgccccaccttcttcatctgcggcagcccgaacgaa
acctcggccggcgccgagccctaccgcaaggccgacgcggccaaggccaagaagatgctg
gccgatgcgggctacaagggcgagaaggtcgtgctgctggtgccgagcgacgtgccctac
ctcaacgccgaggcgctgatggccgcgcagaccatgaagagcatcggcatcaacgttgac
gcgcagaacctggactgggcctccatcggcgcgcgccgcgccaagcgcgatgcgcccgag
gccggcggctggaacatgtacgtgacggtggccggcgagttcgatgccaactcaccgatc
agcaacgcttacctgggcgcggcctgcggcaacacgctgccgggatggccctgcgacaaa
cagctggacgagctgcgcaccgcctggctgaaagagaccgtgcccgccaagcgcaaggaa
ctgctcgacgccttccaggcccgtgcctacgaggccgtgccgtacatcaacgcgggccag
tactcggccgccttcgccgcgcgcgccaacctcaaggggctggacaagctctgggccggc
atgccgatgttctgggcgctcgaccgctga
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