Variovorax paradoxus EPS: Varpa_1724
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Entry
Varpa_1724 CDS
T01392
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Varpa_1724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpe03400
]
Varpa_1724
Enzymes [BR:
vpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Varpa_1724
DNA repair and recombination proteins [BR:
vpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Varpa_1724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
NBAS_11th
Motif
Other DBs
NCBI-ProteinID:
ADU35934
UniProt:
E6V5N7
LinkDB
All DBs
Position
1909777..1910043
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AA seq
88 aa
AA seq
DB search
MPKVPSPSSSSPAATPDTGPLPVSYEAGLQELEQLVAELESGQLPLDQLLGSYQRGAALL
AFCRDKLQAVEDQIKVLDAGSLKVWTAE
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggtgccttccccttcctcttccagcccggcggccacgcccgatacggggccg
ttgcccgtcagttacgaagccgggcttcaggaactggaacaactggttgcagaactcgaa
tcgggccagttgcccctcgatcagctcctgggcagctaccagcgcggcgccgcattgctc
gccttctgccgcgacaagctgcaggcggtcgaagaccagatcaaggtgctcgacgcgggc
agcctcaaggtctggacggccgaatga
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