Variovorax paradoxus EPS: Varpa_1769
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Entry
Varpa_1769 CDS
T01392
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
C4-dicarboxylate transporter, DctM subunit
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_1769
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1769
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_1769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ADU35979
UniProt:
E6V6M3
LinkDB
All DBs
Position
complement(1960845..1962146)
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AA seq
433 aa
AA seq
DB search
MSDIAIAGLLIAALFLILGSGVWIGLTLSGVAWIAMQIFSSRPAGDAMAVTIWGSASSWT
LTALPLFVWMGEILFRTRLSQDMFKGLAPWMQSLPGRLLHTNVVGCAVFAAVSGSSAATC
ATIGKMSLPELKRRGYPDDMVIGTLAGAGTLGLLIPPSIIMIVYGVSADVSIARLFIAGV
IPGILLALLFSGYIVFWALRNPDKVPAADAKLPFKEKLKASMSLIPVALLILSVLGSIYA
GIATATEAAAVGVVGAMVISGAQGSLTWHSFKEALLGATRLYCMMALILAGAAFLTLAMG
YIGLPRHLAEWIGSLGLSKFQLILMLAAFYIVLGCFLDGISMVVLTMGVIMPTVIAAGID
PVWFGIFVVLVVEMAQITPPVGFNLFVLQGMTGKDLLYIARVTLPMFVLMMAAVLLIYFV
PQLVTWLPQQMAP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatcgccatcgcgggcctcctgatcgccgcgctcttcctcatcctgggaagc
ggcgtgtggatcggcctcacgctctcgggcgtggcatggatcgccatgcagatcttctcg
tcgcgccctgccggcgacgccatggccgtgaccatctggggctcggcctcgagctggacg
ctcaccgcgctgccgctcttcgtgtggatgggcgagatcctgttccgcacgaggctttcg
caggacatgttcaagggcctcgcgccctggatgcagagcctgccgggccggctcctgcac
accaacgtggtgggctgcgcggtgttcgccgcggtgtcgggctccagcgccgccacctgc
gccaccatcggcaagatgagcctgccggagctcaagcgccgcggctaccccgacgacatg
gtcatcggcacgctggccggtgccggcacgctcgggctcctgatcccgccctcgatcatc
atgatcgtctacggggtgagcgcggacgtttcgatcgcgcggctgttcatcgcgggcgtc
atcccgggcatcctgctcgcgctgctgttctcgggctacatcgtgttctgggcgctgcgc
aaccccgacaaggtgcccgcggccgacgcgaagctgcctttcaaggagaagctcaaggcc
tcgatgtcgctgatccccgtggcgctgctgatcctgtcggtgctcggctccatctacgcg
ggcattgccacggccaccgaggcggcggccgtgggcgtggtcggcgcgatggtcatctcg
ggcgcacaggggtcgctcacctggcacagcttcaaggaagcgctgctgggcgccacgcgc
ctctactgcatgatggcgttgatcctcgcaggcgcagccttcctcacattggcgatgggc
tacatcggcctcccgcggcacctggccgaatggatcggttcgctcgggttgtcgaagttc
cagctcatcctgatgctggcggccttctacatcgtgctggggtgcttcctggacggcatc
tcgatggtggtgctgaccatgggcgtgatcatgccgaccgtcatcgcggcgggcatcgat
ccggtgtggttcgggatcttcgtcgtgctggtggtcgagatggcgcagatcacgccgcct
gtgggcttcaacctcttcgtgctgcagggcatgacgggcaaggacctgctctacatcgcg
cgcgtgacgctgccgatgttcgtgctcatgatggcggcggtgctgctcatctacttcgtg
ccgcagctggtgacatggctgccccagcagatggcaccctga
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