Variovorax paradoxus EPS: Varpa_1782
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Entry
Varpa_1782 CDS
T01392
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpe03032
]
Varpa_1782
03400 DNA repair and recombination proteins [BR:
vpe03400
]
Varpa_1782
Enzymes [BR:
vpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Varpa_1782
DNA replication proteins [BR:
vpe03032
]
Prokaryotic type
DNA Topoisomerases
Varpa_1782
DNA repair and recombination proteins [BR:
vpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Varpa_1782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADU35992
UniProt:
E6V6N6
LinkDB
All DBs
Position
complement(1973894..1976539)
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AA seq
881 aa
AA seq
DB search
MTSFAKETLPISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFQDNYDGSEKEPKVLPSQLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHLLRNPQATIDELMEIVPAPDFPTAGIIYGINGVKDGYRTGRGKV
VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVNGQPKLCNLKDLIEVFLQHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRSWDSKLV
REMLTRSRADGGVINADDYRPEGLEREFGMGSDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKDVMAEIDDLLDILAKPERVSVIIGDELGTIKQEFGQSKLGARRSLVEHSAFDL
STEDLITPTDMVVTLSHSGYIKSQPLGEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGEKRNFPADQ
YVFMSTSMGTVKKTALDEFNNPRKGGIIAVNLDDGDYLIGAALTDGKHDVMLFSDGGKAV
RFAEDDVRPLGRNARGVRGMSLDPGQGVIAMLVAEDEQQSVLTATENGYGKRTSITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRELGRATQGVT
LIGLDEGAKLSGLQRIVENDANGESEPDADDTSSSSTENPQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacatccttcgccaaagaaaccctgcccatcagtctcgaagaggaaatgcgcagcagc
tatctcgattacgcaatgagcgtgatcgtgggccgggcgctccccgatgcacgcgacggc
ctcaagcccgtgcaccggcgcgtgctcttcgccatgcatgagctcaacaacgactggaac
aggccgtacaaaaagtcggcccgtatcgtcggtgacgtgatcggtaaataccatccgcac
ggcgatcaatcggtctacgacaccatcgtgcgattggcgcaggacttctcgatgcgccac
atgctggtcgatggccagggcaacttcgggtcggtcgatggagacaacgcagccgcaatg
cgttatacggaaatccggctggccaaaattgcgcatgaaatgctggccgatatcgacaag
gaaaccgtcgactttcaggacaattacgacggctccgaaaaagagccgaaagttttgccg
agccagttgccgaatttactggtcaatggctccggcggtattgcggtcggcatggccacc
aatatcccgccgcacaatctgaatgaagtggtggacgcctgcctccacctgctgcgcaat
ccgcaagcgaccatcgacgagctgatggaaatcgtgcctgcgcccgacttccccaccgcc
ggcatcatctacggcatcaatggtgtgaaggacggctaccgcaccggtcgcggcaaggtc
gtgatgcgcgccaagtgccacttcgaggacatcgaccgcggccagcgccaggcgatcatc
gtcgatgagctcccctaccaggtcaacaagaagacgctgcaggagcgcatggccgagctg
gtgcacgagaagaagatcgaaggcatcagccacatccaggacgagtccgacaagtcgggc
atgcgcctggtgatcgagctcaagcgcggcgaagtgcccgaggtcgtgctcaacaacctc
tacaagcagacgcagctgcaggacaccttcggcatcaacatggtggcgctggtcaacggc
cagcccaagctgtgcaacctgaaggacctgatcgaggtcttcctgcagcaccgtcgcgaa
gtggtcacgcgccgcaccgtcttcacgctgcgcaaggcccgcgaacgcggccatgtgctc
gaaggcctggcggtggcgctggccaacatcgacgagttcattcgcatcatccgcgaatcg
ccgacgccgcccgtcgccaaggcagagctgatgacccgcagttgggacagcaagctggtg
cgcgaaatgctcacgcgttcgcgcgccgatggtggcgtgatcaacgccgacgactaccgc
cccgaaggcctcgagcgcgaattcggcatgggctcggatggcctctaccgcctctcggaa
acgcaagcgcaagaaatcctgcagatgcgcctgcaacgcctgaccggcctcgagcaagac
aagatcgtcgccgagtacaaggatgtgatggcagagatcgacgacctgctcgacatcctt
gccaagcccgagcgcgtgtcggtcatcatcggcgacgagctgggcaccatcaagcaggag
ttcggccagagcaagctcggcgcacgccgcagcctggtcgagcacagcgcgttcgacctc
tcgaccgaagacctgatcaccccgaccgacatggtggtcacgctctcgcacagcggctac
atcaagagccagccgctgggcgaataccgtgcgcagaagcgcggcggccgcggcaagcag
gccaccgccacgaaggaagacgactggatcgaccagctcttcattgccaacacgcacgac
tacatcctgtgcttctccaaccgcggccggctctactggctcaaggtgtgggaagtgccg
gcgggttcgcgcggctcgcgcggccggccgatcgtcaacatgttcccgctgcaagagggc
gagaagatcaacgtcgcgctcgccctgaccggcgagaagcgcaacttcccggctgaccag
tacgtgttcatgtcgacctcgatgggcaccgtcaagaagaccgcgctcgacgagttcaac
aacccgcgcaagggcggcatcattgccgtgaacctggacgacggcgactatctgatcggc
gccgccctcaccgacggcaagcatgacgtgatgctcttcagcgacggcggcaaggccgtg
cgcttcgccgaagacgacgtccgcccgctgggccgcaatgcgcgcggcgtgcgcggcatg
tcgctcgacccgggccagggtgtgatcgccatgctggtggccgaagacgagcagcagagc
gtgctcaccgccacggaaaatggttacggaaagcgaacaagcattacggaatacacgcgt
cacggccgcggaaccaaaggcatgatcgcgattcaacagagtgagcgcaacggcaaggtc
gttgccgccaccctcgtgcatgcggacgatgagatcatgctcatcaccgacaagggcgtg
cttgtgcgcacccgggttgccgaaattcgtgaactgggtcgcgcgacgcaaggcgtcacg
ctgatcgggcttgacgaaggcgccaaactcagcgggctacaacgtatcgtcgagaacgac
gcgaacggcgaaagcgagccggacgcggacgatacttcctcatcttcaacggagaatcct
cagtga
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