Variovorax paradoxus EPS: Varpa_1883
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Entry
Varpa_1883 CDS
T01392
Name
(GenBank) chaperone protein DnaK
KO
K04043
molecular chaperone DnaK
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Varpa_1883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpe03019
]
Varpa_1883
03110 Chaperones and folding catalysts [BR:
vpe03110
]
Varpa_1883
03029 Mitochondrial biogenesis [BR:
vpe03029
]
Varpa_1883
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpe04147
]
Varpa_1883
Messenger RNA biogenesis [BR:
vpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Varpa_1883
Chaperones and folding catalysts [BR:
vpe03110
]
Heat shock proteins
HSP70 / DNAK
Varpa_1883
Mitochondrial biogenesis [BR:
vpe03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Varpa_1883
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Varpa_1883
Exosome [BR:
vpe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Varpa_1883
Exosomal proteins of breast cancer cells
Varpa_1883
Exosomal proteins of colorectal cancer cells
Varpa_1883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
DUF3109
MMTV_SAg
Motif
Other DBs
NCBI-ProteinID:
ADU36093
UniProt:
E6V7T0
LinkDB
All DBs
Position
complement(2075098..2077035)
Genome browser
AA seq
645 aa
AA seq
DB search
MAKIIGIDLGTTNSCVSIMEGNTTRVIENSEGARTTPSIVAYQEDGEVLVGASAKRQAVT
NPKNTLYAIKRLIGRKFEEKEVQKDIDLMPYTIAKADNGDAWVEVRGKKMAPQQVSADIL
RKMKKTAEDYLGETITEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAFG
LDKQDKADRKIAVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDY
IIAEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSNSAQTDINLPYITADASGPKHLNIK
LTRAKLESLVDELVERTIAPCRLAIKDAGISVSDINDVILVGGMTRMPKVQEKVKAFFGK
EPRKDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETMGGVMTKMITKNTTIP
TKFAQTFSTAEDNQPAVTIKVFQGEREIASGNKALGEFNLEGIPPAARGTPQIEVSFDID
ANGILHVGAKDKGTGKENKITIKANSGLSEDEIQKMVKDAELNAEDDKKKLEIVQARNQG
EAMVHSVKKSLGEHGASLEAAEKEAIEAAIKDVEEALKGEDKAVIEEKTNTLMTASQKLG
EKMYAESQAAAGASAASGPAGAEAAAHAQADDNVVDAEVKEVKKG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcatcggcatcgacctcggcaccaccaactcgtgcgtgtcgatcatggaa
ggcaacaccacgcgtgtgatcgagaactcggaaggtgcccgcaccacgccgtcgatcgtc
gcgtaccaggaagacggtgaagtgctggtcggtgcctcggccaagcgccaggcggtcacc
aaccccaagaacacgctgtacgcgatcaagcgtttgatcggccgcaagttcgaggaaaag
gaagtgcagaaggacatcgacctgatgccctacaccatcgccaaggccgacaacggcgac
gcatgggtcgaagtgcgcggcaagaagatggcgccgcagcaggtcagcgccgacatcctg
cgcaagatgaagaagaccgccgaagactatctcggcgaaaccatcaccgaagccgtgatc
acggtgccggcgtacttcaacgacgcacagcgccaagccaccaaggatgccggccgcatc
gcgggcctggacgtcaagcgcatcatcaacgagcccaccgctgcggccctggccttcggc
ctggacaagcaggacaaggccgatcgcaagatcgccgtgtatgacctgggcggcggcacc
ttcgacgtgtcgatcatcgaaattgcagacgtggacggcgagaagcagttcgaagtgctg
tcgaccaatggcgacaccttcctcggcggtgaagacttcgaccagcgcatcatcgactac
atcattgccgagttcaaaaaggaacagggcgtcgacctgagcaaggacgtgctggcactg
cagcgcctgaaggaagctgctgaaaaggccaagatcgaactgtcgaacagcgcgcagacc
gatatcaacctgccctacatcacggccgatgcctcgggtccgaagcacctgaacatcaag
ctcacccgcgccaagctggagagcctggtcgacgaactggtcgagcgcaccatcgcgccc
tgccgcctggccatcaaggatgccggcatcagcgtgagcgacatcaacgacgtgatcctg
gtcggcggcatgacccgcatgcccaaggtgcaggaaaaggtgaaggccttcttcggcaag
gaaccgcgcaaggacgtgaaccccgacgaagccgtggccgtcggcgccgccatccagggc
caggtgctctcgggcgaccgcaaggacgtgctgctgctggacgtgacccccctgtcgctc
ggcatcgagaccatgggcggcgtgatgaccaagatgatcacgaagaacaccacgatcccg
acgaagttcgcgcagaccttctcgaccgcggaagacaaccagccggccgtgacgatcaag
gtgttccagggcgaacgcgagatcgcctcgggcaacaaggcgctgggcgagttcaacctc
gaaggcattccgccggcagcgcgcggcacgccgcagatcgaagtgagcttcgacatcgac
gccaacggcatcctgcacgtcggcgcgaaggacaagggcacgggcaaggaaaacaagatc
accatcaaggcgaactcgggcttgagcgaagacgagatccagaagatggtgaaggacgcc
gagctcaacgccgaagacgacaagaagaagctcgagatcgtgcaggcccgtaaccagggc
gaagccatggttcacagcgtgaagaagtcgctgggcgagcacggtgcgagcctcgaggcc
gccgagaaggaagcgatcgaagccgcgatcaaggacgtcgaagaagccctcaagggtgaa
gacaaggccgtgatcgaggaaaagaccaacacgctgatgacggccagccagaagctgggc
gaaaagatgtacgccgagtcgcaagccgcggcgggcgcctcggcagcgagcggaccggct
ggcgcggaagctgctgcgcatgcgcaggccgacgacaacgtggtcgacgccgaagtcaag
gaagtcaagaagggctga
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