Variovorax paradoxus EPS: Varpa_1906
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Entry
Varpa_1906 CDS
T01392
Name
(GenBank) Substrate-binding region of ABC-type glycine betaine transport system
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_1906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1906
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
Varpa_1906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ADU36116
UniProt:
E6V8P4
LinkDB
All DBs
Position
complement(2098924..2100480)
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AA seq
518 aa
AA seq
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MLHLPRRLWRAALLFSMAWMAAVSGPAQAADEALRVGSKRFTESYILAELLAQTAAPHTA
SPPVVRQGLGNTAIVYEALRSGAIDLYAEYTGTIALEILKGSPADTREAMNAALAPMGLG
VAIPLGFNDGYALAVRAADAERLGLRTLSDLAKHPELKLGLSNEFLGRADGWKGLAARYG
FTQTPTGLDHGLAYEAVAAKQIDAIDIYTTDAKIDHLGLRVLEDDRRYFPRYDAVVLYKL
DLPTRLPKAWAALQTLEGKVDEHAMIAMNARAELQSVPFDVIARDFIAGTGKTGAAPAQD
TRRGFTAKLFGPDLWKLARQHLLLVAVSVGIAILIGVPIAILVFSHVRLRAVVLGIASLM
QTVPSLALLAVLISMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGM
TPPQSLQLVLLPLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALNDRELL
LAGALPAAAMALISEGIFELIEWTMRRRRRAPPSSLPQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctgccccgccgcctctggcgcgccgccctgttgttctcgatggcctggatg
gccgcggtctccggccccgcgcaggccgcggacgaggcgctgcgcgtcggctccaagcgc
ttcaccgagtcgtacatcctcgccgagctgctcgcgcagacggcggcgccgcataccgcg
tcgccgcccgtcgtgcggcaggggctgggcaacacggccatcgtctacgaagcgctgcgc
tcgggcgccatcgatctctatgccgagtacaccggcaccatcgcgctcgaaatcctcaag
ggctcgccggcggacacacgcgaggcgatgaacgcagcgcttgcgccgatgggtttgggc
gtggcgattccgctgggcttcaacgacggctatgcgctggccgtgcgtgcggccgatgcg
gagcggctcgggcttcgcacgctgagcgatcttgcgaagcaccccgaactcaagctcggc
ctttcgaacgaattcctcggccgtgccgatggctggaagggcctggccgctcgctacggg
ttcacgcaaacgccgaccggcctcgaccatggcttggcgtatgaagcggtggccgccaag
cagatcgatgcgatcgacatctacaccaccgacgcgaagatcgatcacctgggccttcgc
gtgctggaggacgaccggcggtactttccgcgctacgacgcggtggtgctttacaagctc
gatctgcccacgaggctgccgaaagcatgggccgcgctgcagacgctcgaaggcaaggtc
gacgagcacgcgatgatcgccatgaacgcacgcgccgaactgcagagcgtgcccttcgac
gtgatcgcgcgcgacttcatcgccggcaccggcaagacaggagcggcgccagcgcaggac
acccgccgcggcttcaccgccaagctcttcggccccgacctctggaagctcgcgcgccag
cacctgctgctggtggcagtgtcggtgggcatcgcgatcctgatcggcgtgccgatcgcg
atcctcgtgttctcgcatgtgcggctgcgtgccgtggtgctcggcatcgcgagcctgatg
cagacggtgccttcgctggcgctgttggcggtgttgatttcgatgctcggcgcgatcggt
gcgctgccggccttgatcgcgctcaccctctactcgctgctgccgatcatgcgcaacacg
gtgacgggtctggccgaagtgccgaacgggctgcggctcgcgggcaccgcgctcggcatg
acgccgccgcagagccttcagctcgtgctgctgccgctggcgctgcctacgctgttggcg
ggcgtgcgcacggccaccgcgattgccatcggtacggcgacgattgcggcattcatcggc
gcaggtggattcggcgagcgcatcgtgaccggcctcgcactgaatgaccgcgaactgctg
ctggccggcgcactgccggctgcggcgatggcgttgatcagcgaagggatcttcgaactg
atcgagtggacgatgcgccgtcgccgacgcgcaccgccatcttcgcttccgcaatga
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