Variovorax paradoxus EPS: Varpa_1920
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Entry
Varpa_1920 CDS
T01392
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_1920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1920
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_1920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
ADU36130
UniProt:
E6V8Q8
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All DBs
Position
2115781..2116965
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AA seq
394 aa
AA seq
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MQRRHLIQTAGLSAIALATAFALPLASAQSNTFKIGLILPMTGQQASTGRQIEAAARLYM
AQNGDTVAGKKIELIVKDDVATPDVTKRLAQELIVNDKVNVIAGFGVTPAALAAAPLATQ
SKTPQVVMAAATSSITEASPYIVRSSFTLPQVSVVMGDWAPKNGVKTVVTLVADYGPGND
AEKFFSERFQLNGGKVIEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAGAAVMKQF
LERGMDKAGIKLIATGDVTDDDQLNDMGDGALGVVTSHHYSAAHPSAMNKKFVEAFQKAN
PKMRPNFMAVGGYDGMRVIYEALKTTKGQGGGEALLAAMKGQVFESPRGQVLIDAQTRDI
VQDVYLRKVEKKDGQLYNVEFDVIKGVKDPGKAK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacgccacctcatccagaccgcgggcctctcggcgatcgcgctcgccaccgcc
ttcgcactgccgctggccagcgcgcagagcaacaccttcaagatcggcctcatcctgccg
atgaccgggcagcaggcctccaccggccggcagatcgaagccgcggcgcgcctgtacatg
gcgcagaacggcgacaccgtggccggcaagaaaatcgagctgatcgtcaaggacgacgtg
gccacgcccgacgtcaccaagcgccttgcgcaggaactcatcgtcaacgacaaggtgaac
gtgatcgccggtttcggcgtcacgccggccgcgctggccgccgcgccgctggccacgcaa
tcgaagacgccgcaggtcgtgatggccgcggccacgtcgagcatcaccgaggcctcgccc
tacatcgtgcgctccagcttcacgctgccgcaggtgtcggtggtcatgggcgactgggcg
ccgaagaacggcgtgaagacggtggtcacgctggtggccgactacggccccggcaacgac
gccgagaagttcttcagcgagcgcttccagctcaacggcggcaaggtgatcgagaaactc
cgcgtgccgctgcgcaaccccgacttcgcgccgttcctgcagaaggtgcgcgacgccaag
cccgatgcgctgttcgtcttcgtgccctcgggcgcgggcgcggcggtgatgaagcagttc
ctggaacgcggcatggacaaggccggcatcaagctgatcgccaccggcgacgtgaccgac
gacgatcaactcaacgacatgggcgacggcgcgctgggcgtggtcacctcgcaccactac
tcggccgcccacccctccgcgatgaacaagaagttcgtcgaagccttccagaaggccaac
cccaagatgcgcccgaacttcatggccgtgggcggctacgacggcatgcgcgtgatctac
gaagcgctcaagaccaccaagggccagggcggcggcgaagcgctgctggcggccatgaag
ggccaggtcttcgagagcccacgcggccaggtgctgatcgatgcgcagacccgcgacatc
gtgcaggacgtgtacctgcgcaaggtcgagaagaaggacgggcagctctacaacgtcgag
ttcgatgtgatcaagggtgtgaaggacccgggcaaggcgaagtaa
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