Variovorax paradoxus EPS: Varpa_2005
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Entry
Varpa_2005 CDS
T01392
Name
(GenBank) alpha/beta hydrolase fold protein
KO
K19707
sigma-B regulation protein RsbQ
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpe03021
]
Varpa_2005
Transcription machinery [BR:
vpe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Varpa_2005
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Abhydrolase_4
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
ADU36213
UniProt:
E6V9S5
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Position
2188941..2189774
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AA seq
277 aa
AA seq
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MSVFIVGIAMNLQQRNNIHVQGDGKQTMIFAHGFGCDQNMWRFMAPRFADRFRVITLDLV
GAGGSDLRAYDRSKYASLQGYADDLIEIACEYGIGPVQFVGHSVSAMIGMLADLKAPGTF
ASHMMIGPSPCYINEGDYVGGFTHEDIDSLLDTLESNYLGWASNMAPAIMGVPDRPELGA
ELTASFCRTDPEIAKQFAKVTFMSDNRKDLPDFRTPTLIIQSSDDLIAPMAVGDYMHRAL
PHSMLRVVTNIGHCPHLSAPSESSDAMDEFLDRLDRP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttttcattgttggcatcgccatgaatctccagcaacgcaacaacattcacgtg
caaggcgatggcaagcagaccatgatcttcgcgcacggttttggctgtgatcagaacatg
tggcgtttcatggcgccgcgctttgctgaccgcttccgcgtcatcactttggatcttgtt
ggagccggtgggtccgacctgcgcgcctacgatcgatccaagtatgcgagcctgcagggg
tacgcagatgatttgatagagattgcgtgcgagtatgggatcggtcctgtgcaattcgtt
ggtcattcggtcagcgcgatgatcggcatgctggctgacctcaaggcgccaggcaccttc
gcctctcacatgatgattggcccctcgccttgctacatcaacgagggggactacgtcggt
ggcttcacgcacgaagacattgattccttgctggacacgctggaaagcaactatctgggc
tgggcgagcaacatggcgccggcgatcatgggcgtgcctgaccggcccgaactcggtgcc
gagctgacggccagcttttgccggacggacccggagatcgccaagcagtttgcgaaggtc
actttcatgtccgacaaccggaaggatctcccagatttccggactccgacgttgatcatt
cagtcttcggacgatctgatcgctccgatggccgtcggtgactacatgcaccgcgctttg
ccccatagcatgttgcgcgttgtgacgaacatcggtcactgcccgcatctaagcgccccc
agcgagagcagtgacgcgatggatgaatttctcgacaggctcgaccggccgtaa
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