Variovorax paradoxus EPS: Varpa_2046
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Entry
Varpa_2046 CDS
T01392
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpe03036
]
Varpa_2046
03400 DNA repair and recombination proteins [BR:
vpe03400
]
Varpa_2046
Chromosome and associated proteins [BR:
vpe03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Varpa_2046
DNA repair and recombination proteins [BR:
vpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Varpa_2046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
TMF_DNA_bd
Histone_HNS_N
AAA_13
V-SNARE
FlxA
Packaging_FI
Kre28
kleA_kleC
SlyX
Motif
Other DBs
NCBI-ProteinID:
ADU36253
UniProt:
E6V9W5
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All DBs
Position
2234979..2235323
Genome browser
AA seq
114 aa
AA seq
DB search
MASTLADINSQIKKHDEQIAQLRKQAEDLRNQERAGVIEELRKKIAEFGLTASDLKLGGR
GAAVKRSAGAAAPKAAAKYRGPTGETWSGGRGRKPRWVTEALAAGKSLSDYEIK
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaccctcgccgatatcaattcccagatcaagaagcacgacgagcagattgct
caattgcggaagcaggctgaagacctccgtaaccaagaacgcgcgggcgtgatcgaagag
ttgcgcaagaagatcgcggaattcggtttgaccgcttccgacctgaaactcggcggccgc
ggtgcagccgtcaaacgcagtgcaggtgccgcagcacccaaggcagccgccaaataccgc
ggcccgaccggcgaaacctggtccggtggccgtggccgcaagccgcgctgggtgaccgaa
gcattggctgccggcaagtcgctttctgattacgagatcaagtaa
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