Variovorax paradoxus EPS: Varpa_2070
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Entry
Varpa_2070 CDS
T01392
Name
(GenBank) TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2070
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_2070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Autotransporter
DUF2827
Motif
Other DBs
NCBI-ProteinID:
ADU36277
UniProt:
E6VAS3
LinkDB
All DBs
Position
2256688..2258904
Genome browser
AA seq
738 aa
AA seq
DB search
MATHSPRTYPHRLALLPLLITSGFGMAATTAWSQQVAALGEVVVSGSRSEQAKDDLPLSI
EVINRDDIESKQIHDIRDAVRDLPNVSVKRSPARFGLAQGNTGRDGNAGFNIRGLDGNRV
LLLTDGIRTPRSYVFSANAFGRDYFDIGLVERIEIIKGPASALYGSDGLAGLVNFITREP
SSFLRDGRTFGGSANIGYSGEDNGVRGGVTLAGKANDALEWLISANLGRASELENMGRLD
VPNVDRTTPNPQRDNTRSLLAKAILTPNADQRHSFTFEHVEKSSRYNLLSGVAKPPYAST
SVVGLNAKTDLDRDRLTYEGRLRLNTVVADNLLAVVSYQKAESREYIYEDRFTAADRTRD
VTYDENTWQLGLQADKTIRMGDWAQKITYGLDYTRTNVENLQTGLVPPAGESYPLKRFPD
TRETSSAFYVQDEFIHDRWSITPGIRFDRFSLDAKQAGFSAQAVSLSGSAVSPKLGVLFR
ATPQFSVYGNYASGFKAPNAFQVNNFFENVISGYKTIPNPNLKPEKSQNIELGVRGRTGV
LSFDVAAFTGDYKNLIVNDKLVGGRGIPRIDPSIYQSVNVGRARISGFEIKGELDFTENG
IGFSVPFAYGQTRGRDRTNNRPLNSIDPQKFNAGLKYQAPVWSVRLDAVHHGAKKWNDVD
RSEVTTGLQFRTPQATTFDISAQWRIKKDLRLNASVTNLTDKRFWMWSDVRGLTTTSNLR
DAYTQPGRAFNVSLVADF
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggccactcattcccctcgcacgtatccccatcgcctcgcgctcctgccgctgctgatc
acttcgggcttcggcatggccgcgaccaccgcgtggtcccagcaagttgccgcgctcggt
gaagtggtcgtgagcggatcgcgctcggaacaggccaaggacgacctgccgctgagcatc
gaggtcatcaaccgcgacgatatcgaatccaagcagatccacgacatccgcgatgcggtg
cgcgacctgccgaatgtctcggtcaagcgctcgcccgcgcgcttcgggctcgcgcagggc
aacaccggccgcgatggcaacgcgggcttcaacatccgcggcctcgacggcaaccgcgtg
ctgctgctgactgacggcatccgcacgccgcgcagctacgtcttcagcgccaacgccttc
ggccgcgactacttcgacatcggcctcgtcgagcgcatcgagatcatcaagggcccggcg
tcggcgctctatggctcggacggcctcgcgggccttgtcaacttcatcacccgcgaacct
tcgtcgttcctgcgcgatggccgcaccttcggcggcagcgcgaacatcggctacagcggc
gaagacaacggcgtgcgcggcggcgtcacgctggcgggcaaggcgaacgacgcgctcgag
tggctcatctccgccaacctcggccgcgcgagcgagctcgagaacatgggccggctcgat
gtgcccaacgtcgaccgcaccacgcccaatccgcagcgcgacaacacccgctcgctgctg
gccaaggcgatcctcacgcccaatgccgaccagcggcattcgttcaccttcgagcatgtc
gagaagagcagccgctacaacctgctctccggtgttgccaaaccgccgtatgcgtccacc
tcggtcgtcggcctcaacgcgaaaaccgatctcgaccgcgaccgcctcacctacgaagga
cgcctgcgcctgaacaccgtcgtggccgacaacctgctggctgtcgtgagctaccagaag
gccgagtcgcgcgagtacatctacgaagaccgcttcaccgccgccgaccgcacgcgcgac
gtcacctacgacgagaacacctggcaactcggcttgcaggcggacaagaccatccgcatg
ggcgattgggcgcagaagatcacctacggcctggactacacccgcaccaacgtcgagaac
ctgcagaccggcctcgtgccgccggcgggcgagagctatccgctcaagcgcttccccgac
acgcgcgagacctcgtcggccttctatgtgcaggacgagttcatccacgaccgctggagc
atcacgcccggcatccgctttgatcgcttctcgctcgatgcgaagcaggcgggcttcagc
gcgcaggcggtgtcgctttcaggttcggcagtgtcgcccaagctgggggtgctgttccgc
gctacgccgcagttcagtgtctacggcaactacgcctccggcttcaaggcgcccaacgcg
ttccaggtcaacaacttcttcgaaaacgtgatctcgggctacaagacgattcccaacccg
aacctcaagcccgaaaagagccagaacatcgagctgggcgtacgcggtcgcaccggcgtc
ctgagcttcgacgtggccgcgttcaccggcgactacaagaatctcatcgtgaacgacaag
cttgtcggggggcgcggcatcccgcgcatcgacccgtcgatctaccagtcggtcaatgtc
ggacgcgcgcgcatcagcggcttcgagatcaagggcgagctcgacttcaccgagaacggc
atcggcttctccgtgcccttcgcctatggccagacgcgcgggcgcgaccgcaccaacaac
cggccgctcaactccatcgatccgcagaagttcaatgccggcctcaagtaccaggcgccc
gtctggagcgttcgcctcgacgcggttcaccatggcgccaagaagtggaacgacgtcgat
cgcagcgaggtgacgactggcctgcagttccgtacgccgcaagccaccacgttcgacatc
agcgcgcaatggcgtatcaagaaggacctgcgcctgaacgcatcggtgaccaacctcacc
gacaagcgcttctggatgtggagcgacgtgcgcgggctgacgacgacctcgaacctgcgc
gatgcctatacccagccggggcgcgccttcaatgtctcgctcgtggcggacttctga
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