Variovorax paradoxus EPS: Varpa_2106
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Entry
Varpa_2106 CDS
T01392
Name
(GenBank) inner-membrane translocator
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_2106
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_2106
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2106
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_2106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ADU36313
UniProt:
E6VAV9
LinkDB
All DBs
Position
complement(2292172..2293209)
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AA seq
345 aa
AA seq
DB search
MRIGTLKQSYVADAALFDSRTQKMWLAIGAALLVLFPFMASDYWLYLACLVAINVASATG
LNILTGYTGLVSLGQAAFMGLGAYTVAIMQTRLGTPFLLNIAAGGVVAMLGGLIVGIPSL
RVKGLYLAIATIAASFITHFLFANLKLTGGTTGISLPPAQLFGLPLDTSFRLYWVIVPVM
LLMVLGAANLFRTRVGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAY
FFRVVTPESFPLLMSIFFLAAIIVGGMGTILGGIFGAVFMTMVPELLKLIVDLLPGGVEM
TVFLSPVRTVVFGLLIVGFLVFEPHGLAEVWRRIRRFFHLWPFRN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggcaccctcaagcaaagctatgtcgccgatgcggcgctgttcgactcgcgc
acgcagaagatgtggctcgcgatcggtgcggcgctgctggtgctgttcccgttcatggcc
agcgactattggctgtacctcgcatgcctcgtggccatcaacgtggcgagcgccacgggc
ctgaacattctcaccggctacaccggcctggtgagcctgggccaggcggcgttcatgggc
ctgggcgcctacaccgtcgcgatcatgcagacgcggctgggaacgcccttcctgctgaac
atcgccgcgggcggcgtggtcgccatgctcggcggcttgatcgtcgggattccctcgctg
cgcgtgaagggcctgtacctggcgatcgcgaccatcgcggcctcgttcatcacgcacttt
ctgttcgccaacctcaagctcacgggcggcaccaccggcatctcgctgccgccggcgcaa
ctcttcggcctgccgctggacacctctttccgcctctactgggtgatcgtgccggtcatg
ctgctgatggtgctgggcgcggccaacctctttcgcacccgcgtgggccgggccttcatc
gcgatccgcgaccgcgacatctcggccgaggtgctgggcattccgctcctgcgctacaag
ctgctgtcgttcgggctctcgtcgttctacgcgggcgtagccggtggcctgtgggcctac
ttcttccgcgtggtcacgcccgagagctttccgctcttgatgtcgatcttcttcctggcc
gccatcatcgtcggcggcatgggcacgatcctgggcggcatcttcggcgcggtgttcatg
acgatggtgcccgagctgctcaagctcatcgtcgacctgctgcccggcggcgtcgagatg
accgtgtttctctcacccgtgcgcaccgtcgtgttcgggctgctgatcgtcggatttctg
gtgttcgagccgcacgggctcgcagaagtgtggcggcgcatacgccgctttttccatcta
tggccgttccgcaactga
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