Variovorax paradoxus EPS: Varpa_2138
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Entry
Varpa_2138 CDS
T01392
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_2138
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Varpa_2138
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
HTH_30
MarR
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ADU36345
UniProt:
E6UUT0
LinkDB
All DBs
Position
complement(2323803..2324687)
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AA seq
294 aa
AA seq
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MRLTQLRSFYAVAREGSFTKAAEHLHVSQPTITTQVRFLEEAYQVELFHRRGRRVQLTEI
GEQLMQLAQQIFSLEGDAVALLGDAGTLRTGHLRVAAVGPYHVTKMLVDFSLRYPGVKVT
VSTGNSQDVLDSLVDYSADVGVLAQMVRDDRFLSVPFSQHPVVMFVPSTHRFARRRNIRL
AELQGERLIMREQGSTTRKALELALAKAKVEVDVVMEISSREVIREAVSQGLGIAAVSSV
EFVPSPDLRMVGFSDTEIFTYAHVLCLAERREMRMVSAFFDTLVPAIEARKRKA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcacacagctgcgttccttctatgccgtggcccgcgagggcagcttcaccaag
gccgccgaacacctgcatgtgagccagcccaccatcaccacgcaggtgcggtttctcgaa
gaggcgtatcaggtggagctctttcaccggcgaggccggcgcgtgcagctcaccgaaatc
ggcgagcagctgatgcagctcgcgcagcagatcttcagcctcgaaggcgatgcggtcgcg
ctgctcggagatgcgggcacgctgcgcaccggccacctgcgcgtggcggccgtggggccc
tatcacgtgaccaagatgctggtcgacttcagcctgcgctaccccggtgtgaaggtcacc
gtaagcaccggcaattcgcaggacgtgctcgacagcctcgtggactacagcgccgacgtc
ggcgtgctcgcgcagatggtgcgcgacgaccggttcctgtcggtgccgttcagccagcac
ccggtcgtgatgttcgtgccatccacgcaccgcttcgcgcgccggcgcaacatccggctt
gcggagttgcagggcgagcggctcatcatgcgggagcaaggatcgaccacgcgcaaggcg
ctcgaacttgcgctcgccaaggcgaaggtcgaggtcgatgtggtgatggagatcagcagc
cgcgaggtgatccgcgaagccgtgtcgcaaggcttgggcattgcggcggtatcgagcgtg
gagttcgtgccgagccccgacctgcgcatggtcggcttcagcgacaccgagatcttcacg
tatgcgcacgtgctgtgcctcgcggagcggcgcgagatgcgcatggtcagcgccttcttc
gacacgctggtgccggccatcgaggcgcgcaagcgcaaggcctga
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