Variovorax paradoxus EPS: Varpa_2162
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Entry
Varpa_2162 CDS
T01392
Name
(GenBank) transcriptional regulator, AraC family
KO
K07506
AraC family transcriptional regulator
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_2162
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Varpa_2162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ADU36368
UniProt:
E6UUV3
LinkDB
All DBs
Position
2353589..2354416
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AA seq
275 aa
AA seq
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MSYNDLALTADSFVMPAPSGLRVDMRQTPAGVVGYEALPDHRIKLHAGAPVPGACRLHKF
LYTRGDLDILPAGATDVWHEEAPSTSIVVRMAPSLLQRTADEMALPAERARLGERHQFRD
AQIEHIALALDAERRAGFPNGTLYTDSLGTALAVHLIAGQKVEAAPVQGLSRPQLRRVTE
YIEANLDGNLSLSALADIAGLSASHLKTQFKRSTGLPVHEYVVHRRVDRARGLLLRSAMP
ASLVALESGFSHQSHMARCMRRVLGVTPGEVRRAG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaacgacctggcactgacggccgacagcttcgtgatgcccgcaccctccggc
ctgcgcgtcgacatgcgccagaccccggccggcgtggtcggctacgaggccttgcccgac
caccgcatcaagctgcacgcgggcgcacctgtgccgggcgcctgccggctgcacaagttt
ctctacacgcgcggcgacctcgacatcctgccggccggcgcgaccgacgtctggcacgag
gaggcgcccagcacctcgatcgtcgtgcgcatggcgccctcgctgctgcagcgcaccgcc
gacgagatggccctgcccgccgagcgtgcgcggctcggcgaacgccaccagttccgcgat
gcgcagatcgagcacatcgccctcgcgctcgatgccgagcggcgcgcgggatttccgaac
ggcacgctgtacaccgacagcctgggcaccgcgctggcagtgcacttgattgcgggacag
aaggtcgaggcggcgcccgtgcaggggctgtcgcggccgcaactgcggcgtgtgacggag
tacatcgaggcgaatctggacggcaatctgtcgctgtccgcgctggcggacatcgcaggc
ctgagcgcctcgcacctgaagacgcaattcaagcgctccaccggcctgccggtgcatgag
tacgtggtgcaccggcgcgtggaccgcgcgcgcggcctgctgctgcgcagcgcgatgccg
gcgagcctcgtggcgctggagagcggtttctcgcaccagagccacatggcgcggtgcatg
cgccgcgtgctcggtgtgacgccgggcgaggtgcggcgcgctggttga
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