Variovorax paradoxus EPS: Varpa_2203
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Entry
Varpa_2203 CDS
T01392
Name
(GenBank) Choline dehydrogenase
Organism
vpe
Variovorax paradoxus EPS
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Ortholog
Paralog
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
Pyr_redox_2
Thi4
NAD_binding_8
Lycopene_cycl
DAO
FAD_oxidored
Gly_rich_2
Motif
Other DBs
NCBI-ProteinID:
ADU36409
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Position
complement(2390190..2391923)
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AA seq
577 aa
AA seq
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MEFDYVIVGGGSGGATLASRLSEDPGVTVCLIEAGGDGRGILVRAPAATVAMLPGRPPIN
NYAYKTVPQPALGGRSGYQPRGRGLGGSSAINAMLYVRGHRDDYDDWARAGCEGWSFDEV
LPYFKRAEGNERGESALHGAGGPLQVSEQQSPRPITEDFIRAAAECGIPRNDDFNGAEQE
GAGLYQVTQFHGGTKNGERCSAAAAYLHPVMHARPNLKVLTGAQALRVVLDGKRATGVEV
RRGGSTEVIRAHREVALCGGAFNSPQLLMLSGIGDPAELGRHGIAVRHALPGVGQNLQDH
TDFILAYTSKDIDLFGIGVKAGLKLMKAIFEWRKSGKGLVATPFAEGGAFIKSSPELRRP
DLQLHFVIAITDDHARKLHMGFGFSCHVCVLRPKGRGDVRLNDSNPLSAPRIDPRFLSDA
EDMALLLQGVKKMREILRAPALQKYRHREVYTADAHTDEELTQHIRARADTIYHPVGTCK
MGVDAMAVVDAQLRVHGIENLRVVDASVMPTLIGGNTNAPTIMIAERAADWMRGPITFDR
AVVDARAPATIPAPSVPLEAAVGAVLSPAPATARSGM
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgactacgtgatcgtgggcggcggctccggcggcgccacgctggcctcccgc
ctcagcgaagacccaggcgtgacggtctgcctgatcgaagccggtggggacggccgcggc
atcctggtgcgggcacccgccgccaccgtggcgatgcttccgggacgtccgcccatcaac
aactacgcctacaagaccgtgccgcagccagccctcggcggacgcagcggctaccagccg
cgcgggcgcggcctcggcggatcgagcgcgatcaacgccatgctctacgtgcgcggccat
cgcgacgactacgacgactgggcgcgcgccggctgcgagggctggtcgttcgacgaggtg
ctgccgtacttcaagcgcgccgagggcaacgagcgcggcgagagcgcgctgcacggcgcg
ggcgggccgctgcaggtctccgagcagcagagcccccgaccgatcactgaagacttcatt
cgcgcggctgcggaatgcggtattccgcgcaacgacgatttcaacggcgccgagcaggaa
ggcgcgggcctctaccaggtcacgcagttccatggcggcacgaagaacggcgagcgctgc
tcggccgccgcggcgtacctgcatccggtgatgcatgcgcgcccaaacctcaaggtgctg
accggcgcacaggccctgcgcgtggtgctcgacggcaagcgcgcgaccggcgtggaagtg
cggcgcggtggcagcaccgaagtcattcgcgcccatcgcgaagtggcgctgtgcggcggc
gccttcaactcgccgcagctgctgatgctctcgggcatcggcgacccggcagagctgggc
cgccacggcatcgctgtgcggcatgcgctgccgggcgtcgggcagaacctgcaggaccac
accgatttcatcctcgcctacacctcgaaggacatcgacctcttcggcatcggcgtgaaa
gccgggttgaagctgatgaaggcgatcttcgagtggcgcaagagcggcaagggcctcgtc
gcgacgccctttgccgaaggcggcgccttcatcaagtcgtcgcccgagttgcgccggccc
gacctgcagctgcacttcgtgatcgcgatcaccgacgaccatgcgcgcaagctgcacatg
ggcttcggcttctcatgccacgtgtgcgtgctgcgccccaagggccggggcgatgtgcgg
ctgaacgattcgaaccccctgtcggcgccgcgcatcgacccgcggtttctgtccgatgcc
gaagacatggcgctgctgctgcagggcgtgaagaagatgcgcgagatcctgcgcgcaccg
gcgctccagaagtaccgacaccgcgaggtctacacggccgatgcgcacaccgacgaagaa
ctcacgcagcacatccgcgcgcgcgccgacaccatctaccacccggtgggcacctgcaag
atgggcgtggatgcgatggcggtggtcgacgcgcaactgcgcgtgcacggcatcgagaac
ctgcgcgtggtcgacgcctcggtgatgccgacgctgatcggcggcaacaccaatgcgccg
acgatcatgatcgccgagcgtgcggcggattggatgcgcgggccgatcacgttcgaccgc
gcggtagtggacgctagagcgcctgcgacgatccccgcaccatcagttcccctggaagca
gcagttggcgcggtgctgagtccagcccccgcaaccgctcgatcaggcatgtag
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