Variovorax paradoxus EPS: Varpa_2272
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Entry
Varpa_2272 CDS
T01392
Name
(GenBank) putative sugar ABC transporter, substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_2272
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Varpa_2272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2272
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Varpa_2272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
VMAP-C
Motif
Other DBs
NCBI-ProteinID:
ADU36477
UniProt:
E6UVZ9
LinkDB
All DBs
Position
complement(2465303..2466442)
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AA seq
379 aa
AA seq
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MKKKSEKSVVPARAVAAAVLALCAAALAPKAMADDFLDAAKKKVEIATMTKEKWDGPTTG
PKAAAGKTIVFVAGDMKNGGIVGVSKGVEEAARAIGWTVRVIDGQGTVSGRTAALNQALA
VKPAGIVVGGFDTTEQKAAFAGAAKSGIPLVGWHSGEQPGPNDKAGLYANVTTVTDDVAD
VAASWVVADSGGKAGVVIFTDSQYAIALYKARAMEAVIKKCGGCTVLSFEDSPISESSTR
MPQLTTSLLQRFGDKWTHSLAINDLYFDFMGPSLTAAGKKGDGSPKAVSAGDGSEAAYQR
IRTQRYQAGTVPEPLNMQGWQIVDELNRAFAKEKWSGYVPKVHLVTTGNVGKDGGPKNVF
DPDNGYRAQYKAVWVAAPK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagagtgagaagagtgtggttcccgcgcgcgccgtcgccgccgccgtgctg
gcgctgtgcgccgccgcgctggcgcccaaggcgatggccgacgacttcctggatgcagcc
aagaaaaaggtcgagatcgccaccatgaccaaggagaagtgggacggccccaccaccggc
cccaaggccgccgcgggcaagaccatcgtcttcgtcgcgggcgacatgaagaacggcggc
atcgtgggcgtgagcaagggcgtggaggaagcggcgcgcgccatcggctggacggtgcgc
gtcatcgacggccagggcactgtcagcgggcgcaccgcggcactcaaccaggcgctggcc
gtcaagcccgcgggcatcgtggtcggcggcttcgacaccaccgagcagaaggcggcgttc
gctggcgcggccaagtcgggcattccgctggtcggctggcactcgggcgagcagcccggg
ccaaacgacaaggccggcctctatgccaacgtgaccaccgtgaccgacgacgtggccgac
gtcgccgcctcgtgggtggtggccgactcgggcggcaaggccggcgtggtgatcttcacc
gactcgcagtacgccattgcgctctacaaggcgcgcgcgatggaagcggtcatcaagaag
tgcggcggctgcaccgtgctgagcttcgaggacagcccgatctccgaaagctccacccgc
atgccgcagctcaccacgtcgctgctacagcgcttcggcgacaagtggacgcattcgctg
gccatcaacgacctgtacttcgatttcatgggcccctcgctcacggcggcgggcaagaag
ggcgatggatcgcccaaggcggtgtcggccggcgacggctccgaggccgcctaccagcgc
atccgcacgcagcgctaccaggccggcacggtgcccgagccgctcaacatgcagggctgg
cagatcgtcgacgaactcaaccgcgccttcgccaaggagaagtggtcgggctatgtgccg
aaggtgcacctggtgacgacgggcaacgtgggcaaggacggcgggccgaagaacgtgttc
gatccggacaacggttatcgggcgcaatacaaggcggtgtgggtggccgcgccgaagtag
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