Variovorax paradoxus EPS: Varpa_2276
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Entry
Varpa_2276 CDS
T01392
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_2276
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Varpa_2276
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Peripla_BP_6
HTH_23
Glyco_trans_4_4
HTH_Tnp_ISL3
HTH_24
GntR
Motif
Other DBs
NCBI-ProteinID:
ADU36481
UniProt:
E6UW03
LinkDB
All DBs
Position
2470240..2471250
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AA seq
336 aa
AA seq
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MADVAARVGVSKMTVSRALNRSAGSDRATSEALRQRILQACEDMGYVIDQTARTFSSKRS
GFIAVLIPSLNNSNFSETAQGITAAVEARGLQVLLGYTDYRVENEERLLRAMLARRPEGV
ILTGGSHTPAARAMLQAAGVPVVETWDLPDQPVEHTVGFSNAEAAGAMVRHLHGQGYRRI
AFIGGTSNRDTRGADRQRGYAQAIRELGLPDGRVISFGQPPISMAQGGEAVAQLIRQWPD
VDAVLCVSDLSAFGALMECQRRGWNVPGRIAIAGFGDFEVARACHPRITTVAVDCVGLGK
AAGELLLRVMDGAADGHRPPPETVMIPFQITQRESS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtggccgcgcgcgtgggcgtctcgaagatgacggtgtcgcgcgcgctcaac
cgcagcgcgggcagcgaccgcgcgacctccgaggcgctgcgccagcgcatcctgcaggcc
tgcgaggacatgggctatgtgatcgaccagacggcgcgcaccttctcgagcaagcgctcg
ggcttcatcgcggtgctgattccgtctctcaacaattccaacttttcagagaccgcgcag
ggcatcaccgcggccgtggaagcgcgcggcctgcaggtgctgctcgggtacaccgactac
cgcgtggagaacgaagagcgcctgctgcgcgccatgctcgcgcgccggcccgaaggcgtg
atcctcaccgggggctcgcacacccccgccgcgcgcgccatgctgcaagcggccggcgtg
ccggtggtcgagacctgggatctgcccgaccaaccggtggagcacacggtcggcttctcg
aatgcggaggcggccggcgccatggtgcggcacctgcatggccagggttaccggcgcatc
gcgttcatcggaggcacctcgaaccgcgacacgcgcggtgccgaccggcagcgcggctac
gcgcaggcgatccgcgaactcggcctgcccgacggccgcgtgatcagcttcggccagccg
cccatctcgatggcgcagggcggcgaagcggtggcgcagctgatccgccagtggcccgac
gtagacgcggtgctctgcgtgtccgacctctcggcgttcggcgccttgatggaatgccag
cgccgcggttggaacgtaccgggccgcatcgcgatcgcgggcttcggcgacttcgaagtc
gcgcgcgcctgccatccgcgcatcaccaccgtggcggtggattgcgtgggcctgggcaag
gcggccggcgagctgctgctgcgcgtgatggatggcgccgccgacggccatcgcccgccg
ccggagacggtgatgatcccgttccagatcacccagcgcgagagttcctga
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