KEGG   Variovorax paradoxus EPS: Varpa_2429
Entry
Varpa_2429        CDS       T01392                                 
Name
(GenBank) type VI secretion protein, VC_A0110 family
  KO
K11896  type VI secretion system protein ImpG
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_2429
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Varpa_2429
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: ADU36629
UniProt: E6UZB6
LinkDB
Position
2628644..2630524
AA seq 626 aa
MDPQLLDYYNKELVYMREAASEFAASHPKIAKRLGMHGIEVADPYVERLIESFSFLSARM
QIKLDAEFPRFTQRLLEVLYPNYLSPTPSMAVAQLHPSVKEGDFTRGFVVPRGTAFHARV
PAGEETPCEFRSSQDVTLWPIEIVDAKLTGAPPDIPALERYLPPHVQVTGALRLRLRTVG
EMGFGALVGLDRLPIYLRGNEHVASHLFELLHTSAVATFVGEPGKLMERPHVVTDGALVH
EGLAPGQGLLPLAWNTFHGHNLLHEYFACPERFYFFTLTQLAPGLARAQGKEIEILVLLS
KPPRSLGALVDAGQFALFSTPVVNLFERRTDRVELNAAQPEFHLVPDRSRPLDFEVYSVQ
RIAGQQAQTTAELEFRPLYQTLNEDEGNHGRYFSVRREQRLASDTSRKYGTRTPYIGTEV
FLSLVDQHEAPYPESLRYLSVKAMLTNRDLPCLVPRNGHSDLAVSDSIPVSAVGLIRPPS
IPKSPFAQREIAWRLIRQLGFNHLPLADMPHREGAQALRDMLRLFVSADSDVLRRQIDSL
VGSRIEPVTRRLPGSGPLIYGRGVQCTLSVDEEGFSGTSPYLLGLVLEHYLARHVSINVF
TQTTLESMQRGTVAKWPVRMGGRGIV
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggacccgcaactgctcgactactacaacaaggaactggtctacatgcgcgaggccgct
agcgagttcgctgcctcgcaccccaagatcgcgaagcgcctgggcatgcacggcatcgag
gtggccgacccgtatgtggagcggctgatcgagtcgttcagttttctctcggcgcgcatg
cagatcaagctggacgcggagttcccgcgcttcacgcagcggctgctcgaagtgctgtac
cccaactacctgagtcccacgccgtcgatggcggtggcgcaattgcaccccagcgtgaag
gagggcgacttcacgcgcggcttcgtggtgccgcgcggcacggccttccatgcgcgcgtg
ccggcgggcgaggaaacgccgtgcgagttccgctccagccaggacgtgacgctgtggccc
atcgagatcgtcgatgccaagctcaccggcgcgccgcccgacatccccgcgctggagcgc
tacctgccgccgcacgtgcaggtgacgggcgcgctgcgtttgcgcttgcgcacggtgggc
gagatgggcttcggcgcgctggtcgggctcgaccggctgccgatctacctgcgtggcaac
gagcatgtggcttcgcatctgttcgagctgctgcacacctcggcggtcgccaccttcgtc
ggcgaaccgggcaagctgatggagcggccgcatgtggtgaccgacggggcgctggtgcac
gaaggactcgcgccggggcaggggctgctgccgctggcgtggaacacctttcacggccac
aacctgctgcacgaatacttcgcgtgccccgagcgcttctatttcttcacgctgacccag
ctggcgccggggcttgcgcgggcgcagggcaaggagatcgagatcctcgtcctgttgagc
aagccgccgaggtcgctgggtgccctggtcgacgccgggcagttcgcgctcttcagcacg
ccggtcgtcaacctcttcgagcggcgcaccgaccgcgtcgaactcaatgcggcgcagcct
gagttccacctggtgcccgaccgctcgcggccgctcgatttcgaggtctattcggtccag
cgcatcgcgggccagcaggcgcagaccacggccgagctggagttccgcccgctctaccag
acgctcaatgaagacgaaggcaaccacggccgctacttctcggtgcgccgcgagcagcgg
ctcgcctccgacacatcgcgcaagtacgggacgcgcacgccgtacatcggcaccgaggtg
tttctttcgctggtcgaccagcacgaggcgccgtatccggagagcttgcgctacctgtcg
gtgaaggcgatgctcacgaaccgcgacctgccgtgcctggtgccgcgcaacggtcattcg
gatctcgcggtgtccgattcgatcccggtgtctgcggtgggcctgatccgcccgccgagc
attccgaagtcgcccttcgcgcagcgcgaaatcgcgtggcggctgattcgccaactcggc
ttcaaccacctgccgctggccgacatgccgcaccgcgaaggcgcgcaggctttgcgcgac
atgctgcggctgttcgtgtcggccgacagcgacgtgcttcgccggcagatcgacagcctc
gtgggctcgcgcatcgagccggtgacgcggcgcctgccgggctcggggccgttgatctac
gggcgcggcgtgcagtgcaccttgagcgtggacgaagaaggcttctcgggcacgagccca
tatctgctggggctggtgctggagcactacctcgcgcggcacgtgagcatcaacgtgttc
acgcagacgacgctcgaatcgatgcagcgcggcacggtggccaagtggcccgtgcgcatg
ggcgggcgtgggatcgtctga

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