Variovorax paradoxus EPS: Varpa_2432
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Entry
Varpa_2432 CDS
T01392
Name
(GenBank) ABC transporter related protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_2432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2432
Transporters [BR:
vpe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Varpa_2432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_16
AAA
AAA_29
ATP-synt_ab
Zeta_toxin
AAA_21
Dynamin_N
Septin
Motif
Other DBs
NCBI-ProteinID:
ADU36632
UniProt:
E6UZB9
LinkDB
All DBs
Position
complement(2631765..2633663)
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AA seq
632 aa
AA seq
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MPARLKSTALWEIVSLFRFFEKLLHPYPAAEPPLPPQGFFAFLWACTHGVRGKIAAMAVL
TAVMSIFEAALFAILGRVVDWLGGQVPSRLWTERGDALMWMAAVLVVSILVVALQTIVKH
QTLAVNLPMRLRWNFHRLMLGQSMAFYQDEFAGRITAKVMQTALAVRDTIFVLADVLVAM
GVYVATMIILVGVLDAQLVWPFVIWLALYIGALAYFVPRLGKVGKAQADARALMTGRVTD
AYTNIATVKLFSYTQREAGFARDAMREFMKTGYGQMRLVSAFEIVNHTLSMGLTAGMAGT
ALWLWSHGTVGVGAVAAATAMALRLQGMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVL
DAADASVLDVPRGEVRFENASFRYADAGRRVIDSLNLTVKPGEKIGLVGRSGAGKSTLVN
LLLRFHDLESGRILIDGQDIAHVTQDSLRSHIGMVTQDTSLMHRSVADNIAYGRPDAAHA
QIEAAAKRAEAHDFIQTLGDASGRRGYEAHVGERGVKLSGGQRQRVAIARVMLKDAPILL
LDEATSALDSEVEAAIQQSLYTLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHR
TLMAQGGLYARLWAHQSGGFLGDSLEDEALGA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgcggctaaagtccacggctctctgggagatcgtgtccttgttccgcttcttc
gaaaaactcctccacccctaccccgccgccgaaccgccattgccgccgcaaggcttcttc
gccttcctgtgggcctgcacgcacggcgtgcgcggcaagatcgccgcgatggcggtgctc
acggccgtcatgtcgatcttcgaggcggcgctgttcgccatcctcgggcgcgtggtcgac
tggctcggcggccaggtgccctcgcggctgtggaccgagcgcggcgatgcgctgatgtgg
atggccgcggtgctggtggtcagcatcttggtggtcgcgctgcagaccatcgtgaagcac
cagacgctggcggtgaacctgccgatgcgcctgcgctggaacttccaccggctgatgctg
ggccagagcatggccttctaccaggacgagttcgcgggccgcatcacggccaaggtgatg
cagaccgcgctcgcggtgcgcgacaccatcttcgtgctggccgacgtgctggtggccatg
ggcgtgtatgtcgcgaccatgatcatcctggtgggcgtgctcgatgcgcagctggtgtgg
cccttcgtcatctggctcgcgctctacatcggcgcgctcgcgtacttcgtgccgcgcctg
ggcaaagtcggcaaggcgcaggccgatgcacgcgcgctcatgaccggccgcgtgaccgac
gcctacaccaacatcgcgaccgtcaagctcttctcgtacacgcagcgcgaggcgggcttt
gcgcgcgatgcgatgcgcgaattcatgaagaccggctacggccagatgcgcctggtgagc
gccttcgaaatcgtcaaccacacgctgagcatgggcctcaccgccggcatggcgggcact
gccctgtggctctggtcgcacggcacggtgggcgtgggcgcggtggctgcggccaccgcg
atggcgctgcggctgcagggcatgtcgcactggatcatgtgggagatgaccagcctgttc
gagaacatcggcacggtgcaggacggcatgaagacgctgtcgcgcccgcgcaccgtgctg
gatgcggcagacgcctcggtactcgacgtgccgcgcggcgaagtgcgcttcgagaacgcg
agcttccgctacgccgatgcgggccgccgcgtcatcgacagcctcaacctcacggtgaaa
cccggcgagaagatcggcctggtcggccgttcgggtgccggcaagtcgacgctggtgaac
ctgctgctgcgctttcacgacctggagagcggccgcatcctcatcgacgggcaggacatc
gcgcacgtcacgcaggactcgctgcgcagccacatcggcatggtcacgcaggacacctcg
ctcatgcaccgctcggtggccgacaacatcgcctacggccggcccgatgcggcgcatgcg
cagatcgaggcagcggccaaacgcgccgaggcgcacgacttcatccagacgctgggcgat
gcgagcggccggcgcggctacgaggcacacgtgggcgagcgcggcgtgaagctctcgggc
ggccagcggcaacgcgtggcgattgcgcgcgtgatgctgaaggacgcgccgatcctcttg
ctcgacgaggcgaccagcgcgctcgactccgaagtggaagcagccatccagcaaagcctc
tacacgctgatggaaggcaagaccgtgatcgccattgcgcaccggctctcgaccatcgcg
gcgatggaccggctgatcgtgctggacgaaggccgcgtggtggaagaaggcgaccaccgc
acgctgatggcgcagggtggcctctatgcgcgcttgtgggcgcaccagagcggcggcttc
ctgggcgacagcctggaagacgaggccctgggggcctga
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