KEGG   Variovorax paradoxus EPS: Varpa_2442
Entry
Varpa_2442        CDS       T01392                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpe03400]
    Varpa_2442
Enzymes [BR:vpe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Varpa_2442
DNA repair and recombination proteins [BR:vpe03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Varpa_2442
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon T2SSK
Other DBs
NCBI-ProteinID: ADU36642
UniProt: E6UZC9
LinkDB
Position
2643033..2646389
AA seq 1118 aa
MPELSAKEERKRQPAKVHALPVPLRKHTVAALPDYAELHCLTNFSFQRGASTPEEVVERA
YQLGYAALAITDECSVAGIVRAYVCRRDMEHTLDEYEREHPEEPPIPRNLTFRLLFGSEF
RFERFRLVVIANDTEGWGNLCEFITAARNTELPKGEYRVSWEDSDVASLQNCQVLFVPHR
ESGGAVDVATLHEDLLAAKALYAGNLWLAVEMLNELDDDLWFVTLMQASEQTGVPLVAAG
DVHMHARSRKPLHDVLTAVREGKTVAECGFALQSNAERHLRQRVRLAELYLPEMLANTLV
VAERCRFDPKVIRDNYKYPLEMLGSNETATQTLARKTWAGAQERYPGGIPDAVRAQLHKE
LDLIRELEYEMFFLTVEDIVRFAKSQKILCQGRGSSANSVVCYCLGITAISPEKSHLLFE
RFLSRHRHEPPDIDVDFEHQRREEVIQYIYEKYGRERAAIAAVVICYRSRSALRDVGKAI
GIDERLVDEFAKDHYWFDDAVLGEQLNAACARVGVKEDEFKLVQWIELTQRLKGFPRHLS
QHVGGFVLTHTKLTRLVPVEKASMKDRSVIQWEKDDLEAMGMLKVDVLALGMLSAIRRGL
DHMNRWRGSMVQMHDVPHDDQKVFDMICDADTVGVFQIESRAQMSMLPRLKPRCYEDLVI
EVAIVRPGPIQGGMVHPYLKQRERVAKGLPIHYEKDELREALERTLGIPIFQEQVMQIAM
IAARFSADEADQLRRAMAAWKRKGGLDKFHAKLVNGMVDNEYPREFAEAIFKQILGFGDY
GFPESHAASFALLVTVSSWLKNYEPACFLAALLDSQPMGFYSPSQLVQDARRHGVEVRPV
DVTHSDFDTTLEARAPDAPRMPPSTDARYAERLGNENQPAVRLGLNRISGLSKEGVERLL
KARAQSPFTSTEDLALRAELDGKDMAALAAADALMSLSGHRRQQVWDATAQRRSPALLKG
VPINEQVLLLPAAPEGEEIVGDYASLGLTLRRHPLALLRPRLSRMKLMSAEELRAQPTGR
TVRACGIVKGRQRPGTANGTIFVTLEDETGNVNVIVWSHVIDAWREPLLKSHLLAVQGTW
QRDDDSGGKVQHLVATGFKDLTPLMGRLAQSNTSRDFH
NT seq 3357 nt   +upstreamnt  +downstreamnt
atgcctgaactgagtgccaaggaagagcgcaagcgccagcctgccaaggtgcatgcgctg
ccggtgccgttgcgcaagcacaccgtggcggcgttgccggactatgccgagctgcactgc
ctgaccaacttcagcttccagcgcggcgcatcgacgccggaagaagtggtcgagcgcgcc
taccaactggggtatgcggcgctggcgatcaccgatgaatgctcggtggccggcatcgtg
cgggcatacgtctgcaggcgcgacatggagcacacgctcgacgaatacgaacgcgagcat
cccgaagaaccgccgatcccgcgcaacctcacgtttcgcctgctgttcggcagcgagttc
cgcttcgagcgcttcaggctcgtggtgatcgcgaacgacaccgagggctggggcaatctc
tgcgaattcatcaccgccgcgcgcaacaccgagctgcccaagggcgagtaccgcgtgagc
tgggaagacagcgacgtcgcttcgctgcagaactgccaggtgctcttcgtgccgcatcgc
gagtccggcggcgcagtggatgtcgccacgctgcacgaagacctgctggccgccaaggcg
ctgtatgcaggcaacctctggctggcggtggaaatgctcaacgaactcgacgacgacctc
tggttcgtcacgctgatgcaggcgagcgagcagaccggcgtgccgctcgtggcggccggc
gatgtgcacatgcatgcgcgcagccgcaagccattgcacgacgtgctgacggccgtgcgc
gaaggcaagaccgtcgccgagtgcggctttgcgctgcagtcgaatgcggagcggcatctg
cggcagcgggtgcgattggcggagctttatctgcccgaaatgctggcgaacacgctggtg
gtggcagagcggtgcaggttcgatccgaaggtcattcgcgacaactacaaatacccgctg
gaaatgctgggcagcaacgagacggcgacgcagacgctggcgcgcaagacatgggcaggg
gcgcaggagcgatatccaggcggcattcccgatgcggtgcgtgcgcaactgcacaaagag
ctggacctgatccgcgagctcgaatacgagatgttctttctcaccgtggaagacatcgtg
cgctttgcaaagtcgcagaaaattctttgtcaggggcgcgggtcgtcggccaattccgtc
gtctgctattgcctcgggatcaccgcgatctcccccgaaaaaagccacctgctgttcgag
cgcttcctgagtcgccatcgtcacgagccgcccgacatcgacgtcgatttcgaacaccag
cgccgcgaagaagtcatccagtacatctacgagaaatacggccgcgagcgcgccgccatc
gccgccgtcgtcatctgctatcgctcgcgcagtgcgttgcgcgacgtgggcaaggccatc
ggcatcgacgagcgattggtcgatgaattcgccaaggaccactactggttcgacgatgcc
gtgctcggcgaacagttgaatgccgcgtgcgcgcgcgtcggcgtgaaggaggacgaattc
aagctcgtccagtggatcgagctgacgcagcggctcaagggctttccgcggcacctgagc
cagcacgtcggtggtttcgtgctcacccacaccaagctcacgcggctggtgccggtcgag
aaggcgtcgatgaaagaccgctccgtcatccagtgggaaaaggacgacctcgaagccatg
ggcatgctcaaggtcgacgtgctcgcgctcggcatgctgagcgccattcgccgcgggctc
gatcacatgaaccgctggcggggctcgatggtgcagatgcacgatgttccccacgacgac
cagaaggtgttcgacatgatctgcgacgccgatacggtgggcgtcttccagatcgagagc
agggcgcagatgtcgatgctgccgcgcctgaagccgcgctgttacgaagacctggtgatc
gaggtggcgatcgtgcggcccgggcccattcagggcggcatggtgcatccgtatctcaag
cagcgcgagcgggtggccaagggcttgccgatccactacgagaaagacgagttgcgcgag
gcgctggaacgcacgctgggcattccgatcttccaggagcaggtgatgcagatcgccatg
attgcggccaggttcagcgccgacgaagccgaccagttgcgtcgtgccatggcggcgtgg
aagcgcaagggcggcctcgacaagtttcacgcgaagctcgtgaatgggatggtggacaac
gagtacccgagggaattcgccgaagccatcttcaagcagatcctcggcttcggcgactac
ggtttccccgagagccacgccgcgagcttcgcgctgctggtcaccgtgagcagctggctc
aagaactacgaacccgcgtgcttcctcgccgcattgctcgactcgcaacccatgggcttc
tacagcccctcgcaactggtgcaggacgcgcgcaggcacggcgtcgaggttcgcccggtc
gatgtcacgcacagcgatttcgacaccacgctcgaggcccgcgcccccgatgcaccgcgc
atgccaccaagcaccgacgcgcgctacgccgagcgcctgggcaacgagaaccagcctgcg
gtgcggctcgggctgaaccgcatttcaggcctctccaaggagggcgtggagcgcctgctg
aaagcgcgcgctcaatcgcccttcaccagcaccgaagacctcgccctgcgcgccgaactc
gacggcaaggacatggccgcgctcgccgcggccgatgcgctgatgtcgctctcgggccat
cgccgccagcaggtgtgggacgccaccgcgcagcgccgctcgccggccttgctcaagggc
gtgccgatcaacgagcaggtgctgctgctgcccgcggcgcccgagggcgaggagatcgtc
ggcgactacgcatcgctcggcctcacgctgcgccgccatccgctcgcgctgctgcgcccg
cgcctttcgcgcatgaagctcatgagcgcggaggagctgcgcgcgcagcccaccggccgc
accgtgcgcgcctgcggcatcgtgaagggccggcagcggcccggaacggccaacggcacc
atcttcgtcactctggaggacgagaccggcaacgtcaacgtgatcgtctggagccacgtc
atcgacgcgtggcgcgagccgcttttgaagtcgcacctgctcgcggtgcagggcacctgg
cagcgcgacgacgacagcggcggcaaggtgcaacacctggtcgccaccggcttcaaggat
ctgacgccgctcatggggcggctcgcgcagagcaacaccagccgggatttccattga

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