Variovorax paradoxus EPS: Varpa_2601
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Entry
Varpa_2601 CDS
T01392
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2601
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_2601
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ADU36801
UniProt:
E6V1P5
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All DBs
Position
complement(2813286..2815448)
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AA seq
720 aa
AA seq
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MTQRRFSHSLALTRSPISRAVAAVFFAAACSAHAQQAALPEVVVNEGATAPQADVSGFGD
VPLRELPLSATVIDSKQLIGSGARRLADLTQFDSSVTDAYNSAGYWDYLTVRGFVLDNRF
NYRREGLPISAETSIPLDNKERVEILRGTSGIQAGTSAPGGLVNYVVKRPTELDLRTVRI
ETTSRGSVLGALDLGGRFGENRQFGYRLNVASENLKPLTHNLDGNRNMFSLAADWRITRD
SVLEFEIEQSRKTQPSQNGYSLLGSVLPAPVDPRINLNNQPWSQPSVFKALTGTVRFSQA
LNADWRWSAQIGQQRLKTDDRLAYAFGCGAEGNYDRYCSDGTFDVYDFRSENERRTQTAG
SLNLKGNVMTGSVRHELGFGLLQSRVRNRFQDQAYNYVGTGNIWATAVVPADPTLTDFNT
NRDERSTELSVQDAIRWNDRFTTWIGARHTRLDRQSIRTDGSRPTGYKDGITTPWIAASY
AIQPGLLAYASWGKGVESQVVPNKSSQYSNAGDALPALSSRQWELGIKGGNDAFNWQLAW
FDISRPMTNLDACNRLGITPCEAKYDGRAVHRGLEAGAQWTQGPWRIGGSMTLMDAKRRG
SIVEPASNGQWPTNVPKQVLRAQAAYRVPSVPGLEVAGQLSHEGRRNVLADGSITLPSWT
RVDAVLRYDTKLRGVNTSWTLAVDNLFDRRYWKESPYQFGHVYLFPGAPRTLRLGLSVAL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacgacgcttttcacattccctggccctgacgcgctcccctatctcgcgtgct
gttgccgccgtgtttttcgcggccgcctgcagcgcacatgcgcagcaggccgcgctgccc
gaagtcgtcgtcaatgaaggcgcgacggcgccgcaggccgatgtcagcggcttcggcgac
gtgccgctgcgcgagctgccgctgtcggccacggtgatcgacagcaagcagctcatcggc
agcggcgcacgccggctcgccgatctcacgcagttcgattcgtcggtgaccgatgcctac
aactccgccggctactgggactacctcaccgtgcgcggcttcgtgctggacaaccgcttc
aactaccggcgcgaaggcctgccgatcagcgccgagacctcgatcccgctggacaacaag
gagcgcgtcgagatcctgcgcggcaccagtggcatccaggcgggcaccagcgcgccgggc
gggctcgtcaactacgtggtgaagcgcccgaccgagctggacctgcgcacggtgcgcatc
gagaccaccagccgcggcagcgtgctcggcgcgctcgacctgggcggccgcttcggcgag
aaccgccaattcggctaccggctcaacgtggcgagcgagaacctgaagccgctcacgcac
aacctggacggcaaccgcaacatgttctcgctcgcggccgactggcgcatcacgcgcgat
tcggtgctggagttcgagatcgagcaaagccgcaagacccagccgagccagaacggctac
agcctcctgggcagcgtgctgcctgcgccggtcgatccgcgcatcaacctcaacaaccag
ccgtggtcgcagccctcggtgttcaaggcgctgaccggcacggtgcgcttcagccaggcg
ctgaatgccgactggcgctggagcgcacagatcggccagcagcgcctgaagaccgacgac
cgcctggcctacgccttcggttgcggcgccgaaggcaactacgaccgctactgctcggac
ggcaccttcgacgtctacgacttccgcagcgaaaacgaacgccgcacgcagaccgcgggc
agcctgaacctgaagggcaacgtgatgaccggcagcgtgcggcacgagctgggcttcggg
ctgctgcaaagccgcgtgcgcaaccgcttccaggaccaggcctacaactacgtcggcacc
ggcaacatctgggcgaccgccgtggtgccggccgatccgacgctcaccgacttcaacacg
aaccgcgacgaacgctcgaccgaactctcggtgcaggacgcgatccgctggaacgaccgc
ttcaccacgtggatcggcgcgcgccacacgcggctcgatcgccagagcatccgcaccgac
ggctcgcgccctacgggctacaaggacggcatcaccacgccgtggattgcggccagctac
gcgatccagcccggactgctcgcgtatgcgagctggggcaagggcgtcgaatcgcaggtc
gtgccgaacaagagttcgcagtacagcaacgccggggatgcgctgcccgcgctcagctcg
cgccagtgggaactgggcatcaagggcggcaacgacgccttcaactggcagctcgcgtgg
ttcgacatctcgcgccccatgaccaacctggatgcgtgtaaccgcctcggcatcacgcca
tgcgaagcgaagtacgacggccgtgcggtgcaccgcggcctcgaagccggcgcgcaatgg
acccagggcccctggcgcatcggcggcagcatgacgctgatggatgccaagcgccgcggc
agcatcgtcgaaccggcaagcaatgggcagtggccgaccaacgtgcccaagcaggtgctg
cgcgcgcaggcggcgtatcgcgtgccctcggtgcccggactcgaagtggcgggacagctc
tcgcacgaaggacggcgcaacgtgcttgccgatggctcgatcacgctgccctcgtggacg
cgcgtcgatgcggtgctgcgctacgacacgaaactgcgcggcgtgaacacgagctggacg
ctggccgtcgacaacctgttcgatcgccgctactggaaggaatcgccctaccagttcggg
catgtctatctgttccctggcgcgccgcgcacgctgcgtctgggcctgagcgtcgcgctg
tga
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