Variovorax paradoxus EPS: Varpa_2648
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Entry
Varpa_2648 CDS
T01392
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_2648
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Varpa_2648
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2648
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Varpa_2648
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ADU36847
UniProt:
E6V1U1
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All DBs
Position
2863877..2864818
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AA seq
313 aa
AA seq
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MKKSMTRCVAAATLALLAGHALAQDKPLKSIGITLGDMANPFFVAIGRSAEAEAKKINPA
VKVTTVSSKYDLNTQVDQIDNFIANKVDVIVLGAADSKGIAPAVRKARAAGVIVVAVDVT
AEGADATVMSDNTMAGAESCKFLAERIGGKGNFVIVNGPPVSSIMDRVKGCKATLAKYPG
IKLVSDNQDAKGSRDGGLAAMANILTAQPKIDAVFGINDPTAIGAELAIRQARRTDIKVT
GGVDGSPDGEAALKAKDSLFVVTPAQDPNEMAAESVRVAYGLLNGRKPAKTMNLMATPLT
TRDNIAGYKGWVR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcgatgactcgctgcgttgcagccgccaccctcgcactgttggcaggccac
gcgctcgcccaggacaagccgctcaaatccatcggcatcacgctgggcgacatggccaat
ccgttcttcgtggccatcggccgcagcgcggaagccgaggccaagaagatcaacccggcg
gtgaaggtgaccaccgtgtcgagcaagtacgacctcaacacccaggtcgaccagatcgac
aacttcatcgccaacaaggtcgacgtgatcgtgctgggcgccgccgactccaagggcatc
gcgccggccgtgcgcaaggcccgcgccgccggcgtgatcgtggtggcggtggacgtgacg
gccgaaggggccgacgccacggtgatgtccgacaacacgatggccggcgccgagtcgtgc
aagttcctggccgagcgcatcggcggcaagggcaacttcgtgatcgtcaacggcccgccg
gtgtcgtcgatcatggaccgcgtgaagggctgcaaggcgacgctggccaagtacccgggc
atcaagctggtgtcggacaaccaggacgccaagggcagccgcgacggtggcctcgcggcc
atggccaacatcctgacggcgcagccgaagatcgatgccgtgttcggcatcaacgacccg
acggccatcggcgcggaactcgcgatccgccaggcgcgccgcaccgacatcaaggtgacc
ggcggcgtggacggctcgcccgacggcgaggccgcgctcaaggccaaggattcgctgttc
gtcgtcacgcccgcgcaggacccgaacgagatggccgccgagagcgtgcgcgtcgcctac
ggcctgctcaacggccgcaagcccgccaagaccatgaacctcatggcaacgccgctcacc
acgcgcgacaacatcgccggctacaagggctgggtgcgttga
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