Variovorax paradoxus EPS: Varpa_2700
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Entry
Varpa_2700 CDS
T01392
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K13888
membrane fusion protein, macrolide-specific efflux system
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2700
Transporters [BR:
vpe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Varpa_2700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
YqfD
Motif
Other DBs
NCBI-ProteinID:
ADU36898
UniProt:
E6V2S8
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All DBs
Position
2912186..2913355
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AA seq
389 aa
AA seq
DB search
MPNTPPRRSRKVLLGIAALVVLAAVAFFWLSPAKKTEYLTATVQRTDLENAVLATGVLQA
LRQVEVGAQVSGQLKSLKVALGQTVKKGDWLAEIDPVISQNTLAQEQAKLENLQAQKLAK
EVRIKQAELTWARQREMLAQDAAPRQDMESADAELRALRADGVSLEAQIRQQKLAMASAQ
TNLSYTRIVAPIDGDVVSISTLEGQTVVAAFQVPTLMKLADLSTMTVKAQVSEADVVRVK
AGLPVYFTILGDPDKRYHGTLRAVQPSPEKINNAVFFNALFDVPNPDRTLRVDMTAQVTI
LLGEAKQALTVPLTALGARGKDGRQEVRVLKPDQSVEKRQVRVGISNNFQAQVLEGLKEG
DVVITGDASALDPASSGNEGGGNNRGKRQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacactcccccgcggcgatcgcgcaaagtccttctcggcattgcagcgctcgtc
gtcctggccgccgtcgccttcttctggctgagcccggccaagaaaaccgaatacctcacc
gccaccgtgcagcgcaccgacctcgagaacgcggtgctcgccaccggcgtgctgcaggcg
ctccggcaagtggaggtgggcgcgcaggtcagcggccagctcaagtcgctcaaggtggcg
ctggggcagacggtgaagaagggcgactggctcgccgagatcgatccggtcatctcgcag
aacacgctggcgcaggagcaggccaagctggagaacctgcaggctcagaagctcgcgaag
gaagtgcgcatcaagcaggccgagctcacctgggcccggcagcgcgaaatgctggcgcaa
gacgccgcgccgcgccaggacatggaaagcgccgatgccgagttgcgcgcgttgcgtgcc
gacggcgtttcgctggaggcgcagatccgccagcagaagctggccatggcctcggcgcag
accaatctttcgtacacccgcatcgttgcgcccatcgacggcgacgtggtctccatcagc
acgctcgaaggccagaccgtggtggccgcattccaggtgcccacgctgatgaagctggcc
gacctctcgaccatgacggtgaaggcgcaggtctccgaagccgacgtggtgcgggtgaag
gcggggctgccggtgtacttcaccatcctcggcgaccccgacaagcgctatcacggcacc
ctgcgcgcggtgcagccttcgcccgagaagatcaacaacgcggtgttcttcaatgcgctg
ttcgacgtgccgaaccccgaccgcacgctgcgcgtcgacatgacggcgcaagtgaccatc
ctgctcggcgaagcgaaacaggcgctcacggttccgctcaccgcgctcggcgcgcgcggc
aaggacggccgccaggaagtgcgcgtgctcaagcccgaccagagcgtggaaaagcgccag
gtgcgcgtgggcatcagcaacaacttccaggcgcaggtgctcgaagggctgaaggagggc
gatgtcgtcatcacgggcgatgcctccgcgctcgacccggcgagcagcggcaacgaaggc
ggcggcaacaaccgaggaaagcgccagtga
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