Variovorax paradoxus EPS: Varpa_2716
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Entry
Varpa_2716 CDS
T01392
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_2716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2716
Enzymes [BR:
vpe01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Varpa_2716
Transporters [BR:
vpe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Varpa_2716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_30
RsgA_GTPase
DUF2721
AAA_22
AAA_21
AAA_29
AAA
SRP54
NTPase_1
AAA_5
MobB
Rad17
NB-ARC
AAA_28
NACHT
TsaE
AAA_23
AAA_25
AAA_15
APS_kinase
nSTAND3
AAA_24
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ADU36914
UniProt:
E6V2U4
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All DBs
Position
complement(2927657..2929441)
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AA seq
594 aa
AA seq
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MQASPGSETPRPPLMRRLARLMTWFGSSRKWWAVGLCGAMLAAITEPLMAALLKPLLDRG
FTRGEMPLWFVPAAVLLLFAVRGIAQFISQYALSRIANEGMQKLRRVLFERLLGAELALF
TRQSASALSNTVVYEVQTGAMLLVQALLGLSRDGFTLIALLGYLVYLNWKLTLIVAFLVP
SISWIMKVFSKRLYKLTQQGQQATDELAYVVEENVLAHRVVRLHGAEQAQERRFEQLSQR
LNRLAVKSTIAQAATTPLTQMMASLALSIVVMIALWQSGKQGFTVGGFVAYITAMLMLIA
PIRRLAEVAGPITRGLAALERGLILVDEVAPESQGSFEMAHADGHIELRNVQVSYRGDDE
QRALDGVSLTIQPGQVVAFVGPSGSGKTTLVNLLPRFVQPSGGQVLLDGHDTSEWKLKSL
RAQFAMVSQDVVMLNDTLAANVALGSEIDRERVNECLVAANLSAHVENLPQGMDTVLGHN
ATQLSGGQRQRLAIARALYKNAPVLLLDEATSALDTESERLVQDALHRLMQNRTTLIVAH
RLSTIQHADRIIVMEQGRIAEQGSHAQLMALDGLYARLQTLAVRSATPGQDPTL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatcccctggcagcgagaccccgcgccctcccctgatgcgccgtctggcgcgt
ctcatgacctggttcggcagctcgcgcaaatggtgggccgtgggcctctgcggggccatg
ctggcggccatcaccgagccgctgatggccgcgcttctgaagccgctgctcgaccgcggc
ttcacccgcggggagatgccgctgtggttcgtgcccgccgccgtgctgctgctgttcgcc
gtgcgcggcatcgcgcaattcatctctcaatatgctttgtcgcgtatcgccaatgaaggc
atgcagaagctgcgccgggtgctgttcgaacgcctgctcggcgccgagctcgctctcttc
acgcgccagtcggcgagtgcgctgtcgaacacggtggtgtacgaggtgcagaccggcgcg
atgctgctggtgcaggcgctgcttgggctttcacgcgatggcttcacgctcatcgcgctt
ctgggctacctggtctatctgaactggaagctgacgctgatcgtcgcgtttctcgtgccc
agcatctcctggatcatgaaggtgttctccaagcgcctctacaagctcacacaacagggc
cagcaggctaccgacgagctggcctacgtggtcgaggagaacgtgctcgcccatcgcgtc
gtgcgactgcatggcgccgagcaggcccaggagcgccgcttcgaacaactgagccaacgg
ctcaaccgcctggccgtgaagtccaccatcgcccaggccgcgaccacgccactcacgcag
atgatggcttcgctcgcgctgtcgatcgtcgtgatgatcgccctctggcaaagcggcaag
cagggcttcaccgtcggtggattcgtcgcctacatcaccgccatgctcatgctgatcgcg
ccgatccggcgcctcgccgaagtggccgggccgatcacgcgcgggcttgctgcgctggaa
cgcggcctgatcctggtcgatgaggtcgcgcccgaatcgcaaggcagcttcgagatggcg
cacgccgatggccacatcgagctgcgcaacgtgcaggtcagctaccgcggcgacgatgaa
cagcgcgcgctcgacggcgtgagcctgaccatccagcctggccaggtggtggctttcgtc
ggcccttcaggctctggcaagaccacgctggtcaacctgctgccgcgcttcgtgcagccc
agcggcgggcaggtgctgctcgatggtcacgacaccagtgagtggaaattgaagagcctg
cgcgcgcagttcgcgatggtgagccaggacgtggtcatgctcaacgacacgctggcggcc
aatgtggcactgggctcggagatcgaccgcgaacgcgtcaacgaatgcctggtcgccgcc
aacctgagcgcccacgtcgagaacctgccgcagggcatggacacggtgctgggccacaac
gccacgcagctctccggcggccaacgccagcgtctcgcgatcgcgcgcgctctctacaag
aacgcgccggtactgctgctcgacgaagccacctcggcgctcgacaccgaatcggaacgg
ctggtgcaggatgccctgcatcgcctgatgcagaaccgcaccacgctgatcgtggcgcat
cggctctcgaccatccagcatgcggaccgcatcatcgtgatggagcaaggccgcattgcc
gagcaaggcagccacgcgcagttgatggcgctcgacgggctctatgcacgcctgcagacg
ttggccgtgcgcagtgcgacgccggggcaagacccgacgctctga
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