Variovorax paradoxus EPS: Varpa_2795
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Entry
Varpa_2795 CDS
T01392
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Varpa_2795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpe03400
]
Varpa_2795
DNA repair and recombination proteins [BR:
vpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Varpa_2795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
MUCL1
DUF6263
DDRGK
Motif
Other DBs
NCBI-ProteinID:
ADU36988
UniProt:
E6V3W4
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All DBs
Position
2999201..3000157
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AA seq
318 aa
AA seq
DB search
MATGSRTLWKGAITFGLVHIPVGLHTASIEQGVDFDWLDKRTMDPVGYKRINKKTGKEID
KDNIVKGVEYEDGKYVVISPDEIEAVYPRTTQTIEIQRFIDANEIPFVYLERPYYVAPIN
KGQKVYALLREVLIKSGKVGLAKVVIATKQHLAVLVPSGKALVLNLLRWGDEVKTLEGLD
LPAAGVKGANVSAAEMKMAEQLVNDMSGKWEPEDFKDEFKHAVMKIVEKKVKAGDTETVI
QPEEEAPEEASNVIDLTELLQRSLKGGGSAKTKAPAARKRSAKTTAKTTAKTTAKSATKT
KARKSPAKKTGAAARKAA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggccactggcagcagaaccctctggaaaggcgcgatcaccttcggcctggtccacatt
cccgtcggcttgcacacggcgagcatcgagcagggcgtggacttcgactggctggacaag
cgcaccatggacccggtgggctacaagcgcatcaacaagaagacgggcaaggagatcgac
aaggacaacatcgtcaagggcgtcgaatacgaggacggcaagtacgtcgtgatctcgccc
gacgaaatcgaagccgtgtacccgcgcaccacccagacgatcgagatccagcgcttcatc
gatgccaacgaaatccccttcgtgtatctggagcgtccgtactacgtggccccgatcaac
aaggggcagaaggtctacgcgctgctgcgcgaggtgctgatcaagtccggcaaggtcggc
ctggccaaggtggtcatcgcgaccaagcagcacctggcggtgctggtgccgtcgggcaag
gcactggtgctcaacctgctgcgctggggtgacgaggtcaagacgctcgagggtctcgac
ctgcccgccgcgggcgtcaagggtgccaacgtatcggccgcggaaatgaagatggcggag
caactcgtgaatgacatgtcgggcaagtgggaacccgaggatttcaaggacgagttcaag
catgcggtgatgaaaatcgtcgagaagaaggtgaaggcgggcgacaccgaaaccgtgatc
cagccggaagaggaggcgccggaagaagcctcgaacgtgatcgacctgaccgagttgctc
caacgcagcctcaagggaggcgggtcggccaagaccaaggcccccgcggccaggaagcgc
agcgccaagaccacggccaagactacggccaagaccacggccaagtccgccaccaagacc
aaggcgcgaaagagccctgcgaagaagacgggcgctgcggccaggaaggccgcgtag
DBGET
integrated database retrieval system
