Variovorax paradoxus EPS: Varpa_2810
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Entry
Varpa_2810 CDS
T01392
Name
(GenBank) ABC transporter related protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vpe03012
]
Varpa_2810
Translation factors [BR:
vpe03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Varpa_2810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_29
MeaB
ATP-synt_ab
AAA_23
MMR_HSR1
RsgA_GTPase
NACHT
RNA_helicase
AAA_18
AAA_13
AAA
NAD1
DUF87
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADU37003
UniProt:
E6V4R7
LinkDB
All DBs
Position
complement(3012656..3014626)
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AA seq
656 aa
AA seq
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MITLKNVILRRSAKKLLDGATVTINPGEKVGLVGRNGAGKSTLFALFNGSLHEDGGDFYV
PKQWRMAQVAQDMPETEESATDFVVGGDTRLAELRATLAAIEAAYAENPDDADIGMELAH
AYTDLADAGEHDAVPRAQALILGLGFKSHELDGPVNSFSGGWRMRLQLARALMCPSDLLL
LDEPTNHLDLDALVWLEAWLQKYPGTMIVISHDREFLDAVTDVTLHIANAQLTRYGGNYS
KFEDMRALQMEQQQVAFSKQQDKIAHLQKFIDRFKAKASKAKQAQSRVKALERMERVAPL
LAEADFTFEFKEPGNIPNPMLSIANASFGYEIEDEAPKTILRGVSRSVLAGQRIGILGAN
GQGKSTLVKTIAREMGALAGEVTEGKGLNIGYFAQQELDVLRPQDNPLEHMVRMARELGS
AVKESTGEQALRGFLGSFNFSGDMVKQPVGTMSGGEKARLVLAMMVWQRPNLLLLDEPTN
HLDLATREALAVALNEFEGTLMLVSHDRALLRSVCDEFWLVGRGVVADFDGDLDDYQRYL
LDEAKRLREEAKIAVREAESAVAAAAAAAVTAKPSAQERQQRSDQAKPIKREIAQIDERL
AAAGVERAALEARLAEPIAPAELAEAGKRLKALNEEIAKLEERWLALSDQLEALAA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgattactctcaaaaacgtcattcttcgccgcagcgccaagaaactgctcgacggcgcc
accgtcaccatcaaccccggtgaaaaggtcggcctcgtcgggcgcaacggcgcgggcaag
tccacgctgttcgcgctcttcaacggctcgctgcacgaagacggcggcgatttctacgtg
cccaagcagtggcgcatggcccaggtggcgcaggacatgcccgaaaccgaggagtcggcc
accgacttcgtggtgggcggcgacacccgcctggccgagctgcgcgccacgctcgcggcc
atcgaggccgcctacgccgagaaccccgacgacgccgacatcggcatggaactggcccac
gcctacaccgacctggccgatgccggcgagcacgacgccgtgccgcgcgcacaggcgctg
atcctgggcctgggcttcaagtcgcacgagctcgacggccccgtcaacagcttctcgggc
ggctggcgcatgcgcctgcaactggcccgcgcgctgatgtgcccgagcgacctgctgctg
ctcgacgagcccaccaaccacttggacctggacgcgctcgtctggctcgaagcctggctg
cagaagtaccccggcaccatgatcgtcatcagccacgaccgcgagttcctcgacgccgtg
accgacgtcaccctgcacatcgccaacgcccagctcacgcgctacggcggcaactacagc
aagttcgaggacatgcgcgcgctgcagatggagcagcagcaggtcgcgttctccaagcag
caggacaagatcgcccacctgcagaagttcatcgaccgcttcaaggccaaggccagcaag
gccaagcaggcgcagagccgggtcaaggcgctggagcgcatggagcgggttgcgccgctg
ctggccgaagccgacttcaccttcgaattcaaggagccaggcaacattcccaacccgatg
ctgtcgatcgcgaatgcaagcttcggctacgagatcgaggacgaagcgcccaagaccatc
ctgcgcggcgtgagccgctcggtgctggcgggccagcgcatcggcatcctgggcgcgaac
ggccagggtaagtcgacgctggtgaagaccatcgcgcgcgaaatgggcgcgctggccggc
gaggtcaccgagggcaagggcctgaatatcggctacttcgcgcagcaggaactcgatgtg
ctgcgcccgcaggacaacccgctggagcacatggtgcgcatggcccgcgagctgggcagc
gcggtgaaggaaagcaccggcgagcaggcgctgcgcgggttcctcggcagcttcaatttc
agcggcgacatggtcaagcagcccgtgggcaccatgagcggcggcgaaaaggcccgcctc
gtgcttgcgatgatggtctggcagcgccccaacctcctgctgctggacgagcccaccaac
cacctggacctcgccacccgcgaagccctggccgtggcgctcaacgagttcgaaggcacg
ctgatgctggtgagccacgaccgtgcgctgctgcgttcggtgtgcgacgagttttggctc
gtgggccgcggtgtcgtcgccgacttcgatggtgacctggatgactatcagcgctatctg
ctggacgaagccaagcgcctgcgtgaagaggccaagattgctgtgcgcgaggcggaaagc
gctgtagctgctgcggctgcggcagccgtcacggccaagcccagcgcgcaggagcgccag
cagcgcagcgaccaggccaagccgatcaagcgcgaaattgcccagatcgatgaacgcctg
gccgcagccggcgtcgaacgggctgcgctggaagcccgcttggccgagccgatcgcgccg
gccgaactcgccgaggcaggcaagcggctgaaggccctgaacgaagaaatcgccaagctc
gaggagcgctggctggccctttcggaccagctggaggctctggcagcctga
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