Variovorax paradoxus EPS: Varpa_2832
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Entry
Varpa_2832 CDS
T01392
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_2832
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_2832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2832
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_2832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
ADU37024
UniProt:
E6V4T8
LinkDB
All DBs
Position
3038195..3039403
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AA seq
402 aa
AA seq
DB search
MQLKWTAVALAALTLVACGKKEEAAAPAATPAPTAAAPAPAAPPADALVVKIGHVGPTSG
PIAHLGKDNEFGAKMAIEDLNAKGLKIGDKVAKFVLVPEDDAGDPKQGTAVAQKLVDEKV
NGVVGHLNSGTTIPASKLYSDAGIPQVSPSATNPKYTRQGFKTTFRVVADDTQLGGTLGK
YAVDTLKGKNIAVIDDRTAYGQGVAEEFEKAAKAAGGTIVGHEFTTDKSTDFNAILTKLK
AAKPDVLFFGGMDAVGGPMLKQVKQLGLNVKFMGGDGLCTGELPKLAGDAIGEDMVVCAE
AGGVDGDFKQPLEDFKAKFKAKNGVEVQIYAPYVYDAVNVLAEAMVKAGSSDPEKYLPEV
GKLQYKGVTGPIAFDEKGDIKNGALTLFTYKGGVRTQIAVVR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgaaatggactgcggtcgcactggctgcactcacgctggtggcttgcggcaag
aaagaagaagctgctgcacccgctgcaacgccagcgcccacggcggctgcccccgcaccc
gcagcacctcctgccgatgcactggtcgtcaagatcggtcacgtcggcccgaccagcggt
cccattgcccacctcggtaaggacaacgagttcggcgccaagatggccatcgaagacctg
aatgccaagggcctcaagatcggcgacaaggttgccaagttcgtgctggtgccggaagac
gatgccggcgatccgaagcaaggcaccgccgtcgctcagaagctggtcgacgaaaaggtc
aacggcgtggtcggtcacctgaattcgggcaccaccattcccgcttccaagctgtacagc
gatgccggcattccgcaggtctcgccgtcggcaaccaaccccaagtacacgcgccaaggc
ttcaagaccacgttccgcgtggtggctgacgacacgcaactgggcggcacgctcggcaag
tacgccgtcgacacgctcaagggcaagaacatcgccgtgatcgacgaccgcacggcttat
ggccaaggcgttgccgaagaattcgagaaggccgccaaggccgcgggcggcaccatcgtg
ggccacgagttcaccaccgacaagtcgaccgacttcaacgccatcctgaccaagctgaag
gctgccaagcccgacgtcctgttcttcggtggcatggacgccgtcggcggcccgatgctc
aagcaagtcaagcagctcggcctgaacgtcaagttcatgggcggcgacggcctgtgcacc
ggcgaactgccgaagctggctggcgatgccatcggcgaagacatggtggtctgcgccgaa
gccggcggtgtcgatggcgacttcaagcagccgctggaagacttcaaggccaagttcaag
gccaagaacggcgtcgaagtgcagatctatgcaccgtacgtgtatgacgcggtcaacgtg
ctggccgaagccatggtcaaggccggttcgtcggatccggaaaagtacctgcctgaagtc
ggcaagctgcaatacaagggcgtgaccggcccgatcgccttcgacgaaaagggcgacatc
aagaacggcgcgctgaccttgttcacgtacaagggtggcgtgcgcacgcagatcgccgtg
gtgcgctga
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