Variovorax paradoxus EPS: Varpa_2884
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Entry
Varpa_2884 CDS
T01392
Name
(GenBank) polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_2884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_2884
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_2884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
Wza_C
Motif
Other DBs
NCBI-ProteinID:
ADU37075
UniProt:
E6V5T4
LinkDB
All DBs
Position
complement(3090969..3092225)
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AA seq
418 aa
AA seq
DB search
MNRTEPASAPQGARVPFFTGSASRGARASFAAARIRWIGLSMLLSLGLCGCAPGFGTPGM
LRSSDGSVGTGKVTTITPELIQAQNARNTGLPPEVRALFGRARSYTIGPGDVVGVIVYDH
PELLPNAGAVIAQQSDPTGVTVAPGFIVDAAGEISFPYIGRTKLQGLTESEASELIARRI
RGFVKAPQVSVRIQSFRSQRAYVEGEVRAPGLQIFTDVPMTLSEALNRAGSITAAGDRSQ
VLLTRGDRTVAIDLLALKRYGADANNIPLRNGDVVYVGARDDSRVYVMGEILRPSALLMR
NGRLSLNEALGDAGGPDLFSSDPGQIYVIRNARRADSALDTADATGTSGTSSTSDGPEIF
NINAKNPAALALADRFELKPRDVVYVDRVPLVSWNRVASLILPAAQVVNLARDTARSR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaccgaaccagcgagtgcgccgcagggcgcccgcgttccgttcttcaccgga
tccgcaagccgcggcgcccgcgcctcgttcgctgcggcgcggatccgatggattgggctg
tcgatgctgctgtcgctcgggctgtgcggctgcgcgccgggcttcggcacgccgggcatg
ctgcgttcgtcggacggctccgtcggcaccggcaaggtgacgacgatcacgcccgagctg
atccaggcgcagaacgcgcgcaacaccggcctcccgcccgaggtgcgcgcgctgttcggc
cgcgccaggtcctacaccatcgggccgggcgacgtggtgggcgtcatcgtctacgaccat
cccgagctgctgcccaatgcgggcgcggtgatcgcgcagcagagcgaccccaccggcgtg
accgtggcgcccggcttcatcgtcgatgccgcgggcgagatcagctttccgtacatcggc
cgcacgaagctgcagggcctcaccgagagcgaggcctcggagctgatcgcgcggcgcatc
cgcggcttcgtgaaggcgccgcaggtcagcgtgcgcatccagtcgttccgcagccagcgc
gcctacgtggagggcgaggtgcgcgcgcccgggctgcagatcttcaccgacgtgccgatg
acgctctcggaagcgctcaaccgcgccggcagcatcaccgccgcgggcgaccgctcgcag
gtgctgctcacccgcggcgaccgcacggtggcgatcgacctgctggcgctcaagcgctac
ggcgcggacgccaacaacatcccgctgcgcaacggcgacgtggtgtacgtgggcgcccgc
gacgacagccgggtctacgtgatgggcgagatcctgcggccctcggcgctcctgatgcgc
aacggccggctgagcctgaacgaggcgctcggcgatgcgggcgggcccgacctgttctcg
tccgacccggggcagatctacgtgatccggaacgcacggcgtgccgacagcgcgctcgat
accgccgatgcgaccggcacgtccggcacatccagcacctccgacgggccggagatcttc
aacatcaatgcaaagaaccccgccgcgctcgcgctggccgaccgcttcgagctgaagccg
cgcgacgtggtctacgtggaccgcgtgccgctggtctcgtggaaccgggtcgcgagcctg
atcctgccggccgcccaggtcgtgaacctcgcgcgcgacaccgcgcgcagcaggtag
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