KEGG   Variovorax paradoxus EPS: Varpa_2904
Entry
Varpa_2904        CDS       T01392                                 
Name
(GenBank) type VI secretion protein, VC_A0110 family
  KO
K11896  type VI secretion system protein ImpG
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_2904
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Varpa_2904
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: ADU37095
UniProt: E6V5V4
LinkDB
Position
3123366..3125246
AA seq 626 aa
MDARLLDYYNRELTYMHELGAEFAQRYPKIAGRLGMRGIEVSDPYVERLLEGFSFLTARI
QLKMDAEFPRFSQRLLEVVYPNFLAPLPAMAVVQIDGNLNEGSLKAGYELPRHTVLRGRM
IKGEQTACEFRTGHPVTLWPIRITEAGIGPVPAEIGHAMPMVARQAKSAITIKLEAVGGA
RFSEMPLDRLEFFLSGAELHALRVLELVAHRSVGAVCRSGPGAQGGSSRIVPLGDEAIRH
EGFDPDQALLPYDARSFQGYRLLHEYFAFPDRYLFFSVKNLRAAVSAIGGSTMEIVILLD
RADADLERLVDAKHFSLFCTPIINLVPRRSDRIPVGPGQHEHHAVIDRTRPRDFEIFTVE
RVTGHMTNGSEEREFRPFLGSFATDDGDFGAYFSLRREPRLVSDRARAQGTRTSYTGSEV
YVSLVDQHDAPFPHSLRHITLDALCTNRDLPLLLPTGLESDFTLRISAPVRSIRILRGPS
RPYPALAEGALTWRLISHLGLNYLSLTDVDAAQGAAALREMLDLYGNLADPAVRRQIQGV
RSMALAPVFRRLPEPGPIVFGRGVEVALKIDEVAFSGASPYLFGAVLEQFFSRHVSLNAF
TEFALSSLQRGEIARWTPRVGRRPAV
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggacgcaaggctgctcgactactacaaccgcgaactcacctacatgcacgagctcggg
gccgagttcgcgcagcgctacccgaagatcgcgggccgcctgggcatgcgcggcatcgag
gtcagcgatccgtacgtggagcgcctgctcgagggcttcagctttctcacggcgcgtatc
cagctcaagatggatgcggagtttccgcgcttctcgcagcgcctcctggaggtggtgtat
cccaacttcctcgcgccgctgcccgcgatggcggtggtgcagatcgacggcaacctcaac
gaaggctcgctgaaggcgggctacgaactgccgcgccacaccgtcctgcgcggccgcatg
atcaagggcgagcagacggcttgcgagttccgcaccggccacccggtcacgctgtggccc
atcaggatcaccgaggccggcatcggccccgtgcccgcggagatcgggcatgcgatgccg
atggtggcgcgccaggccaagagcgcgatcaccatcaagctcgaagcggtgggcggcgcc
aggttctccgagatgccgctcgaccggctcgaattctttctctcgggcgccgagttgcat
gcgctgcgcgtgctcgaactggtggcgcaccgcagcgtgggggccgtgtgccgcagcggc
ccgggcgcccaaggcgggtcgtcgcgcatcgtgccgctgggcgacgaggccatccgccac
gaaggcttcgaccccgaccaggcgctgctgccctacgacgcgcgctcgttccagggctac
cggctgctgcacgagtacttcgcgtttcccgatcgctacctgttcttcagcgtgaagaac
ctgcgcgccgcggtctcggccatcggcggcagcacgatggagatcgtgatcctgctggac
cgcgccgacgccgacctggagcggctggtggacgccaagcacttctcgctcttctgtacg
cccatcatcaacctcgtgccgcgccgcagcgaccgcatcccggtcgggccgggccagcac
gagcaccacgcggtgatcgaccgcacgcgcccgcgcgacttcgagatcttcaccgtcgag
cgcgtcaccggccacatgaccaacggctcggaggagcgcgagttccgccccttcctcggc
tcgttcgcgaccgacgacggcgacttcggcgcgtatttctcgctgcgccgcgaaccgcgc
ctggtgtcggaccgcgcacgcgcgcagggcacacgcaccagctacaccggcagcgaggtc
tacgtgtcgctggtcgaccagcacgacgcgccgtttccgcacagcctgcggcacatcacg
ctcgatgcgctgtgtaccaaccgcgacctgccgctgctgcttccgacggggctcgagtcg
gacttcacgctgcgcatctcggcgcccgtgcgctcgatccgcatcctgcgcggcccgtcg
cggccgtacccggcgctggccgaaggcgcgctcacctggcggctcatcagccacctgggc
ctgaactacctgagcctgaccgacgtcgatgccgcgcagggcgccgccgcgctgcgcgag
atgctcgacctctacggcaacctcgccgatcccgcggtgcgccgccagatccagggcgtg
cgctcgatggcgctcgcgccggtattccgccgcttgcccgagccggggcccatcgtcttc
gggcgcggcgtggaggtggcgctcaagatcgacgaggtcgcgttttccggcgcgagcccg
tatcttttcggcgcggtgctggagcagttcttcagccgccacgtgtcgctcaatgccttt
accgagttcgcgctctccagcctgcagcgcggcgaaatcgcgcgctggaccccacgggtc
ggacgccgccccgccgtatga

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