KEGG   Variovorax paradoxus EPS: Varpa_2918
Entry
Varpa_2918        CDS       T01392                                 
Name
(GenBank) type VI secretion lipoprotein, VC_A0113 family
  KO
K11906  type VI secretion system protein VasD
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Varpa_2918
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_2918
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Varpa_2918
SSDB
Motif
Pfam: T6SS-SciN
Other DBs
NCBI-ProteinID: ADU37109
UniProt: E6V5W8
LinkDB
Position
3145163..3145681
AA seq 172 aa
MQRRTLLQGALATTPLFAGLVSGCASTAKSLPTPYAVTIRIDDGVNPDGRGQAAPILVKV
FELKSSGNFETADYFALQDRDRETLSTELVNADQAIMRSGEERVFKREAGLDSRSIGIIA
GYRKLEAARWRIVLPLKEPKQTNLYKVWQFSPSEQAVRIAIRKTGIELLPSR
NT seq 519 nt   +upstreamnt  +downstreamnt
atgcagcgacgaaccttgcttcaaggcgcacttgcaaccacaccgttgtttgcgggcctc
gtcagtggatgcgcatcgaccgccaagtcgttgcccacgccctatgcggtcaccatccgc
atcgacgacggcgtgaaccccgacggacgcggccaggcagcgccgattctcgtgaaggtc
ttcgaactgaaatcttccggtaacttcgagaccgcagactatttcgcgctccaggaccgc
gaccgcgagacgctttcgacagagctcgtcaatgcggaccaggccatcatgcgaagcggc
gaagagcgtgtcttcaagcgagaagcagggctcgactcgcgctccatcggcatcatcgcg
ggctaccgcaagctcgaagctgcgcggtggcgcatcgtgttgccgctcaaggagcccaag
caaaccaatctgtacaaggtctggcagttttcgccaagcgaacaagccgtgcgcattgcc
atccgcaagacaggcatcgagttactaccaagtcgttaa

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