KEGG   Variovorax paradoxus EPS: Varpa_2919
Entry
Varpa_2919        CDS       T01392                                 
Name
(GenBank) type VI secretion protein, VC_A0114 family
  KO
K11893  type VI secretion system protein ImpJ
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_2919
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Varpa_2919
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: ADU37110
UniProt: E6V5W9
LinkDB
Position
3145844..3147220
AA seq 458 aa
MTVRNSGSARSGAHPQALANRVVWSEGMYLRPQHFQQLERYVEQYVTRRAAGLQGAYWGW
LHLDIDRDAYALGRVSLLGGAGVLPDGTPFSFGIEDAPPPYEVPNDLTDELIVLALPLRR
PGSEEVIFAEDEGSAARFGVIEREVADGNAVALGPAVLQLAAPRLRLARASSLTAEWQAI
GAVRVIERRTDHKLVVDANYIPPVLDASAHAMLRSMIAELHGLLTQRSEALASRLSQPGR
GGVSEVSDFLLLELVNRYLATTWHAQQAVQVHPEQLFIDWLKLACHLATHTSPTRRPVLW
PVYDHDNLNESIRPLMEELRRSLSAVLEQSAIAIELEERSHGVRVGHMPDPVLVRNAGFV
LAVHADLPAEAIQQRFPTQVKIGSVERIRDLVQLQLPGVTVRPLPVAPRQIPYNAGYHYF
ELDKSGDMWRQLEKSGGVAMHLAGDFPGLAMEFWAIRP
NT seq 1377 nt   +upstreamnt  +downstreamnt
gtgacagttcgcaactcgggctccgcaagatcgggcgcccatccgcaggcattggcgaac
cgcgtggtgtggtccgaaggcatgtacctgcggccccagcatttccagcaactggagcgt
tacgtcgagcagtacgtcacgcgtcgcgccgccggcctgcagggcgcgtactgggggtgg
ctgcatctggacatcgaccgcgacgcctatgcgctcgggcgcgtgtcgctgctcggtggc
gccggcgtgctgcccgatggaacgccgttttctttcggcatcgaagacgcgccgccgccc
tacgaagtgcccaacgatctgaccgatgaactcatcgtgctcgcactgccgctgcgcaga
cccggcagcgaagaggtcatctttgccgaggacgagggctctgccgcgcgcttcggcgtg
atcgagcgcgaggtggccgacggcaacgcggtggccctcggcccggcagtgctgcagctc
gcggcgccgcgcctgcgccttgcacgcgcctcgtcgctcaccgcggagtggcaggccatc
ggtgcggtgcgcgtgatcgagcggcgcaccgaccacaagctggtggtcgatgccaactac
atccctccggtgctcgatgcatcggcccacgcgatgctgcgcagcatgatcgcggagctg
cacggcctgctcacgcaacgctccgaggcgctggcttcgcggctctcgcagccgggccgc
ggtggtgtgagcgaggtctccgatttcctcctgctcgagctggtcaaccgctacctcgcg
accacctggcacgcgcagcaggcggtgcaggtgcaccccgagcagttgttcatcgactgg
ctcaagctggcctgccaccttgccacgcacacctcgcccacgcgccgtccggtgctgtgg
ccggtgtacgaccacgacaacctcaacgagagcatccgtccgctgatggaagagctgcgc
cgatcgctgtcggccgtgctcgagcagagcgcgatcgccatcgaactggaggagcgcagc
catggcgtgcgcgtgggccacatgcccgacccggtgctggtgcgcaacgcgggcttcgtg
ctcgcggtgcatgcggacctgccggccgaggcgatccagcagcgctttcccacgcaggtc
aagatcggttcggtcgagcgcatccgcgatctcgtacagctgcagctgccgggcgtcacg
gtgcgaccgctgccggtggcgccgcggcagattccctacaacgcgggctatcactacttc
gagctcgacaagagcggcgacatgtggcgccagctcgagaaatccggcggcgtcgccatg
cacctggccggtgactttccgggcctggccatggagttctgggccatccgtccgtga

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