KEGG   Variovorax paradoxus EPS: Varpa_2920
Entry
Varpa_2920        CDS       T01392                                 
Name
(GenBank) type IV / VI secretion system protein, DotU family
  KO
K11892  type VI secretion system protein ImpK
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Varpa_2920
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_2920
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Varpa_2920
SSDB
Motif
Pfam: DotU OmpA INV_N
Other DBs
NCBI-ProteinID: ADU37111
UniProt: E6V5X0
LinkDB
Position
3147229..3148599
AA seq 456 aa
MNGVNDMAVGPGGFVPPNPGGGNGGGNGGNGDAGGMPASPRGLGQQPESFTAWHDARRPH
AGDAALAGNNPLVAAANPLLDLIPQIRATGHHDAPAQLRENLVDEVRRFETRAQQSGISP
EVIIGARYCLCTAVDEAAALTPWGGSIWSSQSLLVMFHNETWGGEKFFQLLSRLVQNPQQ
HLHLIELIYFCLAMGFEGRFRVIDNGRTQLETLKQRLLQIIRQTRGEIAQPLSPHWQDAT
APVRRTRNWLPVWAVGAVAAVLLVLTFAVLTFNLAGNSDGAFAAVNAVRLPQTARAVVMP
APQPRLQRFLEPEIREGLLTVRDEADRSVVVLRGDGLFASGSDRVLDRYVPVLSRVADAL
NSVEGNVLVSGFSDDQPIRSVRFPSNWQLSQARADSVKKMLAVRITRPERLRAEGRGDAD
PLAPNDSPANRARNRRVEVTLLVAPVTPSAQQGGTR
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgaacggtgtcaacgacatggccgtcggtccggggggcttcgtgccgccgaaccccggc
ggcggtaacggcggcggcaatggcggcaacggcgatgcgggcggcatgccggcatcgccg
cgcgggctgggccagcaacccgaatccttcaccgcatggcacgacgcacggcgcccgcat
gcgggcgatgccgcgctcgcaggcaacaacccgctggtggcggccgccaacccgctgctc
gacctgatcccgcagatccgcgcgacgggccaccacgatgcgccggcgcaattgcgcgag
aacctcgtggacgaagtgcgccgcttcgagacccgcgcgcagcaaagcggcatctcgccc
gaggtgatcatcggcgcgcgctactgcctctgcactgcggtggacgaggccgctgcgctc
acgccgtggggtggcagcatctggtcgtcgcagagcctgctggtgatgtttcacaacgag
acctggggcggcgagaaattcttccagctgctttcgcgcctggtgcagaacccgcagcag
cacctgcacctgatcgaactcatctacttctgcctggccatgggcttcgaagggcgcttt
cgcgtcatcgacaacggccgcacgcagctcgaaaccctgaagcagcgcctgctgcagatc
attcgccagacgcgcggcgaaatcgcgcagccgctgtcgccgcactggcaggacgcgacc
gcgccggtgcgccgcacacgcaactggctgccggtgtgggcggtgggcgccgtggcggcg
gtgctgctggtgctcaccttcgcagtgctcactttcaacctcgcgggcaactccgatggt
gcgttcgcggccgtcaatgcggtgcggctgccgcagacggcgcgcgcggtcgtcatgccc
gcgccgcagccgcgcctgcagcgctttctcgaacccgagatccgcgaaggcctgctgacg
gtgcgcgacgaggccgaccgcagcgtggtggtgctgcgcggcgacgggctcttcgcctcc
ggctccgaccgcgtgctcgaccgctatgtgccggtgctcagccgcgtggccgatgcgctc
aattccgtggagggcaacgtgctggtcagcggcttcagcgacgaccagccgatccgcagc
gtgcgctttccttccaactggcagctctcgcaggcacgcgccgattcggtcaagaagatg
ctggccgtgcgcatcacgcggcctgaacgcctgcgtgccgaaggccgcggcgatgccgat
ccgctcgcgcccaacgattcgccggccaaccgcgcgcgcaaccgccgcgtcgaggtcacg
ctgctggtcgcgcccgtgacgccgtcggcgcagcaagggggaacccgctga

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