Variovorax paradoxus EPS: Varpa_2946
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Entry
Varpa_2946 CDS
T01392
Name
(GenBank) CMP/dCMP deaminase zinc-binding protein
KO
K01563
haloalkane dehalogenase [EC:
3.8.1.5
]
K11991
tRNA(adenine34) deaminase [EC:
3.5.4.33
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00361
Chlorocyclohexane and chlorobenzene degradation
vpe00625
Chloroalkane and chloroalkene degradation
vpe01100
Metabolic pathways
vpe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
Varpa_2946
00361 Chlorocyclohexane and chlorobenzene degradation
Varpa_2946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_2946
Enzymes [BR:
vpe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.33 tRNA(adenine34) deaminase
Varpa_2946
3.8 Acting on halide bonds
3.8.1 In carbon-halide compounds
3.8.1.5 haloalkane dehalogenase
Varpa_2946
Transfer RNA biogenesis [BR:
vpe03016
]
Prokaryotic type
tRNA modification factors
Deaminases
Varpa_2946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MafB19-deam
dCMP_cyt_deam_1
Bd3614-deam
Abhydrolase_1
RMMBL
SNAD4
Motif
Other DBs
NCBI-ProteinID:
ADU37136
UniProt:
E6V5Z5
LinkDB
All DBs
Position
3172993..3174099
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AA seq
368 aa
AA seq
DB search
MQTNDAHWMALALAEARLAAEAGEVPVGAVLVKDGQVIATGRNTPVAQHDPSAHAEINAL
RAGASALGNYRLDGCELFVTLEPCAMCAGAMLHSRLARVVFGATDPKTGAAGSVLDLFAE
PRLNHRTQVQGGVLAQECSAVLQGFFQQRRSVAREQAEPLRDNALRTPAERFASLNDYAF
APHYVQDLPSLQGWRLHYVDEEDEEGAVGSNGQSAPCLCLHGPGEWGYFFRYLVGVQGLR
TLVPDLIGFGKSDKPKREAAHKLEWHRDVLLEWLDRVQPQPVVLVHSVAASELASLLQAA
AADRFVATIAAPDGGERIKDAWRAPYPDRGYEAALRALGPIASSSGPTAAQAALLARLAR
NAMGYSTS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ttgcagacaaacgacgcgcattggatggcgctcgcgctggccgaggcgcgccttgcggcc
gaggcgggcgaggtgccggtgggcgcggtgctggtgaaagacggccaggtcatcgcgacc
ggtcgcaacacacccgtggcgcagcacgacccgagcgcccatgccgagatcaacgcgctg
cgcgccggtgcctccgcgctgggcaactaccggctcgacggctgcgagcttttcgtcacg
ctcgaaccctgcgcgatgtgcgcgggcgcgatgctgcattcgcggctggcgcgggtggtg
ttcggcgcgaccgatccgaagacgggcgccgctggatcggtgctcgatctctttgcggag
ccgcggctcaaccaccgcacgcaggtgcaaggcggcgtgctcgcacaggaatgcagcgcg
gtgctgcagggcttcttccagcagcgccgcagcgtggcgcgcgaacaagccgagcccttg
cgcgacaacgcgctgcgcacgccggccgaacgcttcgcttcgctgaacgactacgccttc
gcaccgcattacgtgcaggacctgccgagccttcagggctggcgcctgcattacgtggac
gaagaggacgaagagggcgcagtgggcagcaacggccaatccgcgccttgcctttgtctg
cacggccccggcgaatggggttacttcttccgctatcttgtcggcgttcaaggtttgcgc
acgctggtgcccgacctcatcggcttcggcaagagcgacaagcccaagcgcgaagccgcg
cacaagctcgagtggcaccgcgacgtgctgctcgaatggctggaccgcgtgcagccacag
cccgtggtgctggtgcacagcgtcgcggccagcgagctcgcatcgttgctgcaagccgcg
gctgccgatcgtttcgtggccacgatcgccgctcccgatggcggcgagcgcatcaaggac
gcgtggcgcgcgccgtaccccgaccgcggctacgaagccgcgctgcgcgcgctcggaccg
atcgcttcgtcctcgggtccgacggcagcgcaggccgcgctgctcgcgcgtttggcgcgc
aacgcaatgggatactcgacctcgtga
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