Variovorax paradoxus EPS: Varpa_3004
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Entry
Varpa_3004 CDS
T01392
Name
(GenBank) alpha amylase catalytic region
KO
K16147
starch synthase (maltosyl-transferring) [EC:
2.4.99.16
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00500
Starch and sucrose metabolism
vpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Varpa_3004
Enzymes [BR:
vpe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.16 starch synthase (maltosyl-transferring)
Varpa_3004
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgE_dom_N_S
GLGE_C
Alpha-amylase
Melibiase_C
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
ADU37191
UniProt:
E6V6Y7
LinkDB
All DBs
Position
3234297..3236366
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AA seq
689 aa
AA seq
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MKNIFSTKPLAAASALDGTGIGFDHGASRAVIDAVLPNVDNGRFAVKCVAGERVTVRAHC
FTDGHDVLRVQLCWRAQDQNQKEFREVPMKPLVNDVWEAAFSPPSVGRYVYTVVAWVDPF
ESWRHEMTRRVDPQDVRIAAQVGALEIAAAAARAEGSDRAELQRWATELDATAANPGADV
TSLKALALDDEYADLVRRHPDRRHAVRHPVELPLVADRERARFSTWYELFPRSAGTMPGV
HGTFRDVEARLPAIAAMGFDVLYFPPIHPVGRMQRKGPNNALEAGPDDVGSPWAIGAAEG
GHKSILPALGTEEDFRHLLARAADHGLEIALDIAFQCAPDHPYVKAHPDWFRWRPDGTVQ
YAENPPKKYQDIYPFNFECEDWRGLWAELKSVFDHWIGEGVRIFRVDNPHTKAFPFWEWV
IGEVKREHPDTIFLAEAFTRPKVMHRLAKLGFSQSYTYFTWRNTKEELQAYFTELSTAPG
IDYFRPNAWPNTPDILHEQLQTGEPAVYMSRLVLAATLAANYGIYGPAYELREHLPRGPG
SEEYLDSEKYQLRHWNHDDPASLAPFIARVNRIRRENPALQRDRGLRFLHVDNDQLLAYA
KASPDGDNVVVTVVNLDPHNAQWGWVGLEPASVGVKDGQPFQMHDLLSGQRFTWQGDWHY
VRLDPHSVPAHIFVVRRRHGDERDFDYFL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacattttctcgaccaagccgctcgccgccgcgagcgccctcgatggcaccggc
atcggcttcgaccatggcgcctcgcgcgcggtcatcgacgcggtgctgcccaacgtggac
aacggccgcttcgcggtcaagtgcgtggcgggcgagcgcgtgacggtgcgcgcgcattgc
ttcaccgacggccacgacgtgctgcgcgtgcagctgtgctggcgcgcgcaagaccagaac
cagaaggaattccgcgaggtgccgatgaagccgctggtcaacgatgtgtgggaggccgcg
ttttccccgccgtcggtgggccgctacgtctacaccgtggtcgcgtgggtcgatccgttc
gagtcgtggcgccacgagatgacgcgccgcgtcgacccgcaggacgtgcgcatcgccgcg
caggtcggcgcgctcgaaatcgccgccgcggctgcccgcgccgagggcagcgaccgcgcc
gagctgcagcgctgggccaccgaactcgatgccacggccgccaacccgggcgcggacgtg
acatcgctcaaggcgctggcgctggacgacgaatacgccgatctggtgcgccgccacccc
gaccgccggcatgcggtgcgccatccggtcgaactgccgctggtcgcggatcgcgaacgc
gcgcgcttcagcacctggtacgaactctttccgcgctcggccggcaccatgcccggtgtg
cacggcaccttcagggacgtggaggcgcgcctgccggccatcgccgcgatgggcttcgac
gtgctgtatttcccgccgatccatccggtcggccgcatgcagcgaaaaggcccgaacaat
gcgctcgaagccggacccgatgacgtgggcagcccctgggccatcggcgcggccgagggc
gggcacaagtcgatcctgccggcgctcggcaccgaagaagactttcggcacctgctcgcg
cgcgcggccgaccacgggctggagatcgcgctggacatcgccttccagtgcgcgcccgac
cacccctacgtgaaggcgcaccccgactggttccgctggcgccccgacggcacggtgcag
tacgcggagaacccgcccaagaagtaccaggacatctaccccttcaacttcgagtgcgag
gactggcgcggcctctgggccgaactcaagagcgtgttcgaccactggatcggggagggc
gtgcgcatcttccgcgtggacaacccgcacaccaaggccttcccgttctgggagtgggtc
atcggcgaagtgaagcgcgagcaccccgacaccatcttcctggccgaagccttcacccgg
ccgaaggtgatgcaccggctcgcgaagctgggcttctcgcagagctacacctacttcacc
tggcgcaacacgaaagaggagctgcaggcttacttcaccgaactctcgaccgcgcccggc
atcgactacttccgccccaatgcctggcccaacacgccggacatcctgcacgagcagttg
cagaccggcgagcccgcggtgtacatgtcgcgcctcgtgctggccgccacgctcgcggcc
aactacggcatctacgggccggcctacgaactgcgcgagcacctgccgcgcggcccgggc
agcgaggagtacctcgactccgagaagtaccagctgcgccactggaaccacgacgacccg
gccagccttgcgcctttcatcgcgcgggtgaaccgaatccgccgcgagaacccggcgctg
cagcgcgaccggggcctgcgctttttgcacgtggacaacgaccagttgctcgcctatgcc
aaggcatcgccggacggcgacaacgtggtggtcaccgtggtcaacctcgacccgcacaac
gcccagtggggctgggtcgggctggagcccgcgagcgtgggcgtgaaggacgggcagccg
ttccagatgcacgacctgctgagcggccagcgcttcacctggcagggcgactggcactac
gtgaggctcgatccgcacagcgtgccggcgcacatcttcgtggtgcgtcgccgacatggc
gacgagcgcgacttcgactacttcctgtag
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