Variovorax paradoxus EPS: Varpa_3054
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Entry
Varpa_3054 CDS
T01392
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00523
Polyketide sugar unit biosynthesis
vpe01110
Biosynthesis of secondary metabolites
vpe01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Varpa_3054
Enzymes [BR:
vpe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
Varpa_3054
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_10
Polysacc_synt_2
NmrA
KR
NAD_binding_4
RmlD_sub_bind
adh_short
Sacchrp_dh_NADP
Peptidase_C42
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ADU37241
UniProt:
E6V7Y0
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Position
3293797..3294915
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AA seq
372 aa
AA seq
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MSQHILITGGAGFIGSHLADELLSHGYRVRVLDNLAPQVHGEDAKRPDYLEPDVELVTGD
VCDPAAVRNALRGIDAVYHLASAVGVGQSMYEVAHYTRVNNLGTAVLMEALIERPVKRLV
VASSMSLYGEGLYRTAGGELRTVQERSLEQLRRGDWEWRDEDGIALQPAPTPEDKAPALA
SVYALSKFDQERMGLMTGRAYGIPTVALRFFNAYGPRQALSNPYTGVLAIFAARLLNDSP
PKIFEDGHQQRDFVSVYDIARACRLALEMPAAAGEVFNVGSGEARSVRDIAQRVAQAVGK
EHLAPEITGKYRVGDIRHCYADIAKARKVLGYTPRVTLEDGLAELAAWLEGQAAVDRVAQ
ASAELTARGLAI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcacattctcatcaccggcggggccggtttcatcggctcgcaccttgcggac
gagctgctctcccatggctaccgcgtccgcgttctggacaacctcgcgccgcaggtgcac
ggcgaagacgcgaagcggcccgactacctggagcccgacgtcgagctggtgaccggcgac
gtgtgcgatcccgcggcggtgcgcaacgcgctgcgcggcatcgacgcggtctaccacctg
gcgtcggccgtgggcgtggggcagagcatgtacgaagtggcgcactacacgcgggtgaac
aacctcgggaccgcggtgctgatggaagcgctgatcgagcggccggtcaagcgcctggtg
gtcgcatcgagcatgagcctctacggcgaaggcctctaccgcaccgccggcggcgagctg
cgcacggtgcaggagcgcagcctggagcaactgcgccgaggcgactgggaatggcgcgac
gaagacggcatcgcgctgcagcccgcgcccacgcccgaggacaaggcgcccgcgctcgcc
tcggtgtatgcgctgtccaagttcgaccaggagcgcatgggcctcatgaccggccgcgcc
tacggcattccgacggtggcgctgcgcttcttcaacgcctacgggccgcgccaggcgctc
tcgaatccctacaccggcgtgctcgcgatcttcgcggcgcgcctgctcaacgacagcccg
ccgaagatcttcgaggacggacaccagcagcgcgacttcgtgagcgtgtacgacatcgcg
cgcgcctgccgcctcgcgctggaaatgcccgccgccgcgggcgaggtcttcaacgtcggc
agcggcgaggcgcgcagcgtgcgcgacatcgcgcagcgcgtggcgcaggccgtcggcaag
gagcacctcgcgcccgagatcaccggcaagtaccgcgtcggcgacatccgccattgctat
gccgacatcgccaaggcgcgcaaggtgctcggctacacgccgcgcgtgacgctggaggac
ggcctggccgaactcgccgcctggctcgaaggccaggccgccgtggaccgcgtggcgcag
gccagcgccgaactcaccgcacgcgggctcgccatatga
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