Variovorax paradoxus EPS: Varpa_3123
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Entry
Varpa_3123 CDS
T01392
Name
(GenBank) MATE efflux family protein
KO
K26937
MATE family, multidrug efflux pump
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3123
Transporters [BR:
vpe02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
Varpa_3123
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ADU37310
UniProt:
E6V8Y7
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Position
3355162..3356616
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AA seq
484 aa
AA seq
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MSAPPATSTTSTTPPVNPTTSATGPSGLKGVPVSPVGAARPLWKVFLFFLAPMLLSNILQ
SLSGTLNNVYVGQMLGVGALAAVSSFFPVMFFFIAFIIGLGAGASVLIGQAWGARDATKA
KAVAGTTLTVGVLMGLVIAVFGGAFTTPMLAALGTPPDVLADSTRYARIMLIAMPGVFVF
LLATAMLRGVGDTVTPLLTLVISTLIGLVVTPALIRGWGGLPQMGVASGAWASVLSFVVA
TTWLGFRLRQKKSPLAPDAEFFRYLRIQPQLLKAVLRIGVPTGVQMIVVALAEVVLLSMV
NSYGSNATAAYGAVNQVVAYVQFPAISIAIAASILGAQAIGAGRADRLGAITKTALLMNL
VLTGGLVLLGYLFSRPLMGFFITSEPVIEIAQTLLHIMLWSLVIFGMAAATSGVMRASGS
VLVPTVISIVCILGVEVPVAWFMSHRIGLDGIWIAYPVTFGAMLLLQTAYYQLVWRKKAI
RTLV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccccccgcgacttcgacgacctcgacaacgccccccgttaatccaacgacc
tccgcaaccggcccgagcggcctcaagggcgtgcccgtgtcgcccgtcggcgcggcgcgt
ccgctgtggaaggtgtttctcttcttcctcgcgccgatgttgctcagcaacatcctgcag
tcgctctcgggcacgctcaacaacgtctacgtcggccagatgctcggcgtgggcgcgctg
gcggcggtgtcgagcttctttccggtgatgttcttcttcatcgccttcatcatcggcctg
ggcgcgggcgcctcggtcctcatcggccaggcctggggcgcgcgcgacgcgaccaaggcc
aaggcggtggccggcaccacgctcaccgtcggcgtgctgatgggcttggtgatcgcggtg
ttcggcggcgccttcaccacgccgatgctggccgcgctgggcacgccgcccgacgtgctg
gccgactcgacgcgctacgcccgcatcatgctgatcgcgatgcccggcgtgttcgtgttc
ctgctcgcgaccgccatgctgcgcggcgtgggcgacaccgtcacgccgctgctcacgctg
gtgatctcgaccctgatcggcctcgtggtcacgcccgcgctcatccgcggctggggtggc
ctgccgcagatgggcgtggccagcggcgcttgggcctcggtgctgtcgttcgtggtggcg
accacctggctgggctttcggctgcgccagaaaaagagcccgctcgcgcccgatgcggag
ttcttccggtatctgcgcatccagccgcaattgctgaaggcggtgctgcgcatcggcgtg
cccacgggcgtgcagatgatcgtggtggcgctggccgaagtggtgctgctgtcgatggtc
aacagctacggctcgaatgccacggccgcttacggcgcggtgaaccaggtggtggcgtac
gtgcagttcccggccatttcgatcgccattgccgcgtcgatcctcggtgcgcaggccatc
ggcgcgggccgtgccgaccggctgggcgcgatcaccaagacggcgctcctgatgaacctc
gtgctgaccggcggcctcgtgctgctgggctatttgttctcgcggccgctcatgggcttt
ttcatcaccagcgagccggtgatcgagatcgcgcagacgctcttgcacatcatgctgtgg
agcctggtgatcttcggcatggccgcggccacgtcgggcgtcatgcgggccagcggctcg
gtgctggtgccgacggtgatctccatcgtctgcatcctgggcgtcgaggtgccggtggcc
tggttcatgagccaccgcatcgggctggacggcatctggatcgcctaccccgtgaccttc
ggcgcgatgctgctgctgcagaccgcgtactaccagctggtgtggcgcaagaaggcgatc
cgcacgctggtgtga
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