Variovorax paradoxus EPS: Varpa_3160
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Entry
Varpa_3160 CDS
T01392
Name
(GenBank) aminotransferase class V
KO
K00830
alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:
2.6.1.44
2.6.1.45
2.6.1.51
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00250
Alanine, aspartate and glutamate metabolism
vpe00260
Glycine, serine and threonine metabolism
vpe00630
Glyoxylate and dicarboxylate metabolism
vpe00680
Methane metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
vpe01210
2-Oxocarboxylic acid metabolism
vpe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Varpa_3160
09102 Energy metabolism
00680 Methane metabolism
Varpa_3160
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Varpa_3160
00260 Glycine, serine and threonine metabolism
Varpa_3160
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Varpa_3160
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpe01007
]
Varpa_3160
Enzymes [BR:
vpe01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.44 alanine---glyoxylate transaminase
Varpa_3160
2.6.1.45 serine---glyoxylate transaminase
Varpa_3160
2.6.1.51 serine---pyruvate transaminase
Varpa_3160
Amino acid related enzymes [BR:
vpe01007
]
Aminotransferase (transaminase)
Class V
Varpa_3160
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ADU37347
UniProt:
E6V924
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All DBs
Position
3399760..3401004
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AA seq
414 aa
AA seq
DB search
MLQLDIHPTGRHFLQIPGPSPVPDRILRAMSLPTIDHRGPEFGTLGLKVLGGIKQIFKTK
HPVAIYPASGTGAWEAALANTLSPGDHVLMYETGHFASLWQKMATRLGLSTEFLALAGTD
EHLPNAPSWRRGVQAELIEARLRKDTEKKIKAVCVVHNETSTGVTSDIASVRKAIDAAGH
PALLMVDSISGLASADFRHDEWGVDVTISGSQKGLMLPPGISFNALSPRALEVSKTAKLP
RAFWAWDEIVEMNKDGYWPYTPNTNLLYGLSESLDMILGEGLDNVFARHQRWGAGVRAAV
NAWGLPIQCADPAVYSPVLTGVITPEGVDADALRRLIHQRFDLSLGTGLGKLKGRMFRMG
HLGDSNDLTLVAMVAGVEMGMKLSGIKLAGSGVQATMDYFANHAAAPVGLQKAA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaactcgacatccatcccaccggccgccatttcctccagattcccggcccgagc
ccggtgcccgaccgcatcctgcgggccatgagccttcccaccatcgaccaccgcgggccc
gagttcggcacgctcggtttgaaggtgctcggcggcatcaagcagatcttcaaaacgaag
catccggtcgcgatctaccccgcttcgggcaccggcgcctgggaggccgcgctcgccaac
acgctgagcccgggtgaccacgtgctcatgtacgagaccggccacttcgcttcgctctgg
cagaagatggccacgcgcctcggcctctcgaccgaattcctcgcgctcgccggcaccgac
gaacatttgccgaatgcgccgagctggcgccgcggcgtgcaggccgaactcatcgaggcg
cgccttcgcaaggacaccgagaagaagatcaaggccgtgtgcgtggtgcacaacgagacc
tccaccggcgtcacctccgatatcgcctcggtgcgcaaggccatcgacgcggccgggcat
cccgccctcttgatggtcgacagcatctcgggcctcgcgagcgccgatttccggcacgac
gaatggggcgtggacgtcaccatcagcggctcgcagaagggcctgatgctgccgcccggc
atcagcttcaacgcgctctcgccgcgcgcgctcgaagtctcgaagaccgccaagctcccg
cgcgccttctgggcgtgggacgagatcgtcgagatgaacaaggacggctactggccctac
acgccgaacaccaatctgctctacggcttgtcggaatcgctggacatgatcctcggcgag
ggcctggacaacgtgttcgcgcgccaccagcgctggggcgcgggcgtacgcgccgctgtc
aacgcctggggcctgccgatccagtgcgcggaccctgccgtctactcgcccgtgctcacc
ggcgtgatcacacccgaaggcgtcgatgccgacgcgctgcgccgcctgattcatcagcgc
ttcgacctctcgctcggcaccggcctcggcaagctcaagggccgcatgttccgcatgggc
catctgggcgacagcaacgacctgaccctcgtggccatggtcgcgggtgtcgagatgggc
atgaagctctcgggcatcaagctcgcgggcagcggcgtgcaggcgacgatggactatttc
gccaatcacgcggcggcccccgtcggcttgcagaaagccgcctag
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